Helicovermis profundi: HLPR_19250
Help
Entry
HLPR_19250 CDS
T09891
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit
Organism
hprf
Helicovermis profundi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
AAA_22
AAA_16
Sigma54_activat
nSTAND3
IstB_IS21
AAA_14
TniB
RuvB_N
Zeta_toxin
AAA_7
RNA_helicase
Mg_chelatase
bpMoxR
DNA_pol3_delta2
UVR
ResIII
AAA_24
RsgA_GTPase
NACHT
AAA_18
ATPase_2
TsaE
NB-ARC
AAA_33
AAA_28
Torsin
zf_Tbcl_Rhp7
DUF4428
Motif
Other DBs
NCBI-ProteinID:
BEP29594
UniProt:
A0AAU9EN93
LinkDB
All DBs
Position
complement(2163041..2165326)
Genome browser
AA seq
761 aa
AA seq
DB search
MEKCSVCKKNIAVVYTTVIEDGKKISKPLCFDCAKKMGIPIMDEMMKQMKVDPDDLENIS
SQMSKIFEDMNLSDSDEDPLSQMMNLAMGGDDFEILDKKEMQKETKEKIEDVKEDTRDEK
IKKAKKKKLKNLEKFGSNLIDKARENKIDKVIGRKKEIDRVIQILNRRSKNNPVLIGEPG
VGKTAIAEGLALRIVEKKVPIKLLNTEVYLLDMTSIVAGTQFRGQFEGRMNAIIKEAKIH
GNVILVIDEVHNIMGAGEVHGGVMNAANILKPALAKGEVQIIGATTIDEYRKHIEKDAAL
ERRFQPVMVDEPTIEESIEILKGIKSYYEDFHKVKISDIVIEEAVRMSEKYITDRFLPDK
AIDVIDEAGSRLNLKNTSLVEYENLKNEIKKIAEEKEIASLHEEFERAAELKVHEIHLQE
KLNECKMINEHLELTTEDVAYVIEAWTKIPVGKLTEEESIKLIDLENRLHKRVIGQNKAV
SALSKAIRRNRSGFRKKKKPSSFIFVGPTGVGKTELARTLANELFGSEDALIRMDMSEYS
EKHTISKLIGSPPGYVGYENGGQLTEKIRRRPYSVILLDEIEKAHSDVFNVLLQILEDGR
LTDGQGRTVFFENAVIIMTSNAGTDIKANGIGFESNNYEKLEKKVLSALNQYFRPEFLNR
VDDVVVFNHLSRKELELIADLLIEEVEEEVKEKGMSLSVDSASKEFLIKEGYDEKYGARP
LRRTIQKYIEDEIAELFIKKEVIKGNLIKVVFKDGKICVEK
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaatgttctgtatgtaagaaaaatatagcggtagtttatactactgtaattgaa
gatggtaaaaaaataagtaaaccattatgttttgattgtgcaaaaaaaatggggatacct
attatggatgaaatgatgaaacagatgaaagtagatcctgacgatcttgaaaatatttct
agtcaaatgagtaagatatttgaagatatgaatttgtcggattcagatgaggatccactt
tctcaaatgatgaatttagcaatgggtggagatgattttgaaatattagataaaaaagaa
atgcaaaaagaaacaaaagaaaaaattgaagatgtaaaagaagatacaagagatgaaaaa
attaaaaaagctaaaaagaagaaacttaaaaatttagagaagtttggttcaaatttaatt
gataaagctagggaaaataaaatcgataaagttattggaagaaaaaaagaaattgataga
gttattcaaatactaaataggagaagtaaaaataatcctgttttaattggtgaaccaggg
gttggtaaaacagcaattgcggaaggattagctctaaggatagtagaaaaaaaagtacct
attaaactactaaatactgaagtttatttgcttgatatgacttcaattgtagctggaaca
cagtttagaggtcaatttgaaggtagaatgaatgcgattattaaagaggcaaagattcat
gggaatgtaattttagtaatagacgaagttcataatattatgggtgctggagaagtacat
ggtggtgttatgaatgctgcaaatatattaaaaccagctcttgcaaaaggtgaagtacaa
ataattggagctacaactattgatgaatatagaaaacatatagaaaaagatgcagcttta
gaaagaagatttcagcctgttatggttgatgaaccaacaattgaagagtctattgagata
ttaaaaggaataaaatcatattatgaagattttcataaagttaaaataagtgacattgta
attgaagaagctgttagaatgtcagaaaaatatataacagatagatttttgccagataag
gctattgacgttatagatgaagctggttcaagattgaatttgaaaaacacttcattagta
gaatatgagaatttgaaaaatgaaataaaaaaaattgctgaagaaaaagaaattgcttct
ttacacgaagagtttgagagagctgctgagttaaaagtacacgaaattcatcttcaggaa
aaattaaatgaatgtaaaatgattaatgaacatcttgaacttacaacagaagatgttgct
tacgttattgaggcatggactaaaattcctgttggaaaacttacagaagaagaatccata
aaactcattgatttagaaaataggcttcataaaagagttattggacaaaataaagcagtt
agtgctttatcaaaagcaattagaagaaataggtctggttttagaaagaaaaagaaaccg
tcttcttttatctttgttggtcctactggagtaggaaaaactgaacttgccagaacttta
gcaaatgaactttttggatcagaagacgctcttattaggatggatatgagtgagtactca
gaaaaacatactatatcaaaattaattggatcacctccaggatatgttggttacgaaaat
ggtggacaattaactgaaaaaataagaagaagaccttattcggtaattcttttagatgaa
attgaaaaagctcattctgatgtatttaatgtattactacaaatacttgaagatggaaga
ctgactgatggtcaaggaaggactgtattctttgaaaatgcggttataattatgacatct
aatgcaggaacggatataaaagcgaatggaattggatttgaaagtaataattacgaaaag
cttgaaaaaaaagtattatcagctttaaatcagtattttagaccagaatttttgaatcgc
gtagatgatgtagtcgtatttaatcatttaagtaggaaagagctagaactaatcgctgat
ttactcattgaagaagttgaagaagaagttaaagaaaaaggtatgagtttaagtgtggat
agtgcttcgaaagaattccttattaaagaaggttatgatgaaaaatatggagcaagacct
cttagacgaacaattcaaaaatatattgaagatgaaattgcagaattgtttataaaaaaa
gaagttataaagggaaatttaataaaagtagtttttaaggacggaaaaatttgtgtggaa
aaataa
DBGET
integrated database retrieval system
