Helicovermis profundi: HLPR_21770
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Entry
HLPR_21770 CDS
T09891
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hprf
Helicovermis profundi
Pathway
hprf03420
Nucleotide excision repair
hprf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hprf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HLPR_21770
03430 Mismatch repair
HLPR_21770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hprf03400
]
HLPR_21770
Enzymes [BR:
hprf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HLPR_21770
DNA repair and recombination proteins [BR:
hprf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HLPR_21770
MMR (mismatch excision repair)
Other MMR factors
HLPR_21770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
BEP29846
UniProt:
A0AAU9E593
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All DBs
Position
2451020..2453116
Genome browser
AA seq
698 aa
AA seq
DB search
MDILRKIEVQTDLKFNEEQIKAIMHFSGPALTLAVPGSGKTTLLLARTINLIEKYKVKAS
SILTITFSKAASLDMNRRYEKVFYDSFPYKIKFSTIHSFCYQIFKAYCKKKNLKYTLIET
NSYLSKQKILSKIYLDLNKSYITEDKLEELSNSISFIKNMLIDTENIEDEITTFSNLKNI
FIEYENFKSKNMYIDFDDMLTLTFDILKNHPKALEYYRKKYDFIQVDETQDTSKIQHEII
KLIANNNKNVFMVADDDQSIYGFRGAYPEMLLNFSKEYKNASIYYLKTNYRSYSNIIDVC
NDSIKSNTIRYKKEIKAHFEAKGNVEIINFDSTFDRNNFIINQLKKNTSEDYGILYRNNI
SGISVANELELKNISFNIRDSKLLLFKHWVTKDIKLILSLSLITQDLSTFEDVYYKINGY
ISKKMIQFVKLNHRNRNVFDVLLEYPDLKKHQITKLKSIRSHFQLLAKSKPADAIRIIEE
ELGYTEFLSTRSDVDDYSFLSLVNIIVILKEIASSCDSILSFFERLDTLEEFLNSNSKNY
YANTKLSTIHSAKGLEYDNVFIIDAENELFPNGSAVSKFKKNIISPLEEERRLFYVGISR
AKKTLRILNVKFKNGTYVKPSIFTNEISKNNNIVIKTIKTKKNNDNLKFNIGDVVIHNVF
GEGVVKDSSSNIVKVEFNKSIKELSTNVVIEYGLMKLK
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggatatactaagaaaaattgaagttcaaacagatttaaaatttaacgaagaacaaatt
aaagctataatgcattttagtgggcctgctcttacacttgccgttcccggcagtggtaaa
acaacactcctactcgcaaggacaattaatttaatagaaaaatataaggtaaaggcttca
tcaatacttacaattacctttagtaaagctgcttctttagatatgaatagaagatatgaa
aaagtattttatgattcatttccatacaaaattaaattttcaacaattcatagtttttgc
tatcaaatttttaaggcttattgtaagaaaaaaaatttgaaatatacattaatcgaaact
aatagctatctatcaaagcaaaaaattcttagcaaaatatatttggatttaaataaatct
tatatcaccgaagataaattagaagaattatctaattctattagttttataaaaaatatg
cttattgatactgaaaatatcgaagacgaaattacaacattttctaaccttaagaatatt
tttatagaatatgaaaattttaaatcaaagaatatgtatattgattttgatgatatgcta
actttaacatttgatattttgaaaaaccatcctaaagcacttgaatactatagaaaaaaa
tacgattttattcaagtagatgaaactcaagatacaagtaaaatacaacatgaaatcatt
aaattaatagctaataataacaaaaatgtttttatggttgctgatgatgatcaaagtatt
tatggatttagaggtgcttatcctgaaatgctactaaatttctctaaagaatacaagaat
gcatcaatttactatttaaaaactaattacagaagttattcaaatattattgatgtttgt
aatgattcaataaaatcaaatactattcgttataaaaaagaaataaaagctcattttgaa
gcaaaaggtaatgttgaaattattaattttgatagcacttttgatagaaataactttata
ataaatcaacttaaaaaaaatacgtccgaagactatggtattctttatagaaataatata
tcaggaatttctgtagcaaatgaactagaattaaaaaatatatcttttaatataagagat
agtaaattattattatttaaacactgggtaacaaaagatattaaactcattctctctctt
agcttaatcacgcaagacttatctacttttgaagacgtttattataaaattaatggttat
atctctaaaaaaatgattcaatttgtaaaactaaatcataggaatcgcaatgtatttgac
gttcttttagaataccccgatttaaaaaagcatcaaataactaagctaaaatctattaga
agtcactttcaacttctagctaaatcaaaacctgctgatgctattagaataatagaagaa
gaattaggttacactgaatttctaagcacccgctctgatgtagatgactattcattcttg
tctcttgtaaacattattgtgatactaaaagaaattgcttcttcatgtgactctatatta
agtttttttgaaaggcttgatactcttgaagaattcttaaactctaattcaaaaaactat
tatgcaaatacaaaactttcaactattcattctgcaaagggacttgaatatgataatgtt
tttattattgatgctgaaaacgaacttttcccaaatggtagtgcagtttctaaattcaaa
aaaaatataatttctccacttgaagaagaaagaagattgttttatgttggaatttcaaga
gctaaaaagacacttagaattcttaatgtaaaatttaaaaacggtacttatgtaaaacca
tctatattcactaatgaaatatcaaagaataataacattgtaataaaaaccattaaaact
aaaaaaaataacgacaaccttaaatttaatataggcgatgtcgttattcataatgttttt
ggtgaaggtgtagttaaagattcatctagcaatattgtaaaagtagaattcaataaatct
ataaaagaactttccacaaatgttgtaatagaatacggacttatgaaattaaaataa
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