Helicovermis profundi: HLPR_21880
Help
Entry
HLPR_21880 CDS
T09891
Name
(GenBank) 3'-5' exoribonuclease YhaM family protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
hprf
Helicovermis profundi
Brite
KEGG Orthology (KO) [BR:
hprf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hprf03019
]
HLPR_21880
Messenger RNA biogenesis [BR:
hprf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HLPR_21880
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_anti-codon
HD
TraI_2
Motif
Other DBs
NCBI-ProteinID:
BEP29857
UniProt:
A0AAU9EAN6
LinkDB
All DBs
Position
complement(2462235..2463185)
Genome browser
AA seq
316 aa
AA seq
DB search
MKNIIEFEVGDDIQSFFIIKDLNLKTSSNNKKYFDMTLSDKTGQMNSKVWDIKDEMIDLY
KTGAIVKVKGVVTLWQNNKQLKISKIRLKNDADNVDINELVPSAPIEPSLMYKEIFELTD
LMENNDVKKLVQYFLTENKEKLMYYPAAKSNHHSIRAGLLYHILRMLKVGKGLVKVYPNI
DSDLLYAGIILHDMEKINEMISDEMGIVSSYSFNGQLLGHLIMGIKKVDEAAKKLNVDEE
ISSLIQHMILSHHYEPEFGSPKKPLIPEGELLHYIDMIDARMYDMDKALSSVDTGEFTDG
VYVLDRRRLYKSKFNK
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatataatagaattcgaagttggagatgatattcaatctttttttataatcaaa
gatttaaatttaaagacttcatcaaataataaaaagtattttgatatgacattatcggat
aaaactggacaaatgaattctaaagtttgggatataaaagacgaaatgatagatctttat
aaaactggcgccatagttaaagttaaaggtgtagtaactttatggcaaaataataagcag
ttaaaaatttcaaaaataaggcttaaaaatgatgcagacaatgtggatataaacgagtta
gttccttcagctccaattgagcctagccttatgtataaggagatttttgagcttacagac
cttatggaaaataatgatgtaaaaaaattagttcaatattttttaactgaaaataaggaa
aagttaatgtattatcctgcggctaaaagtaatcaccatagtattagagctggtttactt
tatcatattttaagaatgcttaaagtaggtaaaggtttagttaaggtttatcctaatatt
gatagcgatttactttatgcagggataattttacatgatatggagaaaataaatgagatg
atttcggatgaaatgggtattgtttcgagttattcatttaatggacaattacttggacat
ctgattatgggtataaaaaaagtagatgaggctgcaaaaaaattaaatgttgatgaagaa
atttcttcgttaattcagcatatgattttgtctcatcactatgaaccagagtttggaagt
cctaaaaaaccgcttatacctgaaggtgaactattacactatattgatatgattgacgct
agaatgtacgatatggataaagctttaagtagtgtagacacgggtgaatttacagatgga
gtttatgttcttgataggagaagactttataaatcaaaatttaataaatag
DBGET
integrated database retrieval system
