Helicovermis profundi: HLPR_21990
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Entry
HLPR_21990 CDS
T09891
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hprf
Helicovermis profundi
Pathway
hprf03420
Nucleotide excision repair
hprf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hprf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HLPR_21990 (pcrA)
03430 Mismatch repair
HLPR_21990 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hprf03400
]
HLPR_21990 (pcrA)
Enzymes [BR:
hprf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HLPR_21990 (pcrA)
DNA repair and recombination proteins [BR:
hprf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HLPR_21990 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
HLPR_21990 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
ResIII
AAA_30
AAA_11
Cdh1_DBD_1
Motif
Other DBs
NCBI-ProteinID:
BEP29868
UniProt:
A0AAU9EJU8
LinkDB
All DBs
Position
complement(2474738..2476927)
Genome browser
AA seq
729 aa
AA seq
DB search
MNIDLLNDMQKEAVINTEGPLLILAGAGSGKTRVLTHRIAYLIEEKEVFPSNILAITFTN
KAAKEMRIRVEKLIGEASNGMWMGTFHSICVKILRRYASLIGYERDFVIYDPTDQKTLAR
ECLKELNIDEKKTTFRYVLGKISEAKNDMLTPKEYEKLYSGDFYLDKVVKVYELYQRKLI
NNNAMDFDDLILNAIKVLKENEKILSDYQRKFKYVLVDEYQDTNKAQYVLVRYLSMGYVN
LCVVGDNDQSIYGWRGADIRNIRDFEKDFPGAKIIKLEQNYRSSVNILNAANNVIKNNIN
RKSKKLWTDNDLGEKIHYYKAQSEMDEAYFVVRNLIADKKRNKRNNLDYAVLYRTNAQSR
VLEDAFRREGVSYKLVGGTKFYDRREIKDFISYMRIIQNPVDELSIKRAINIPKRGIGPK
TIEKIKGFAYENNLSLYQALVYAAKKDLFSKKINKGIKEFVTIIEKYKNDALERKVSFLM
EDVLNDIGYIEELKLDNTLESRSRIENLREMISAAKEFERTSETGLLAEFLEEFSLRSDI
DNVEEDDDSVLLMTLHSAKGLEFPIVFMVGLEEGIFPSSRSLNEDESVEEERRLMYVGIT
RAEEKLFITHSSIRSMYGKTSCNLVSRFIEEIPSELLDVPKDEVASRKTRKTSFTSQMKA
DLAYKEKSKSKIEDVTVIKTGTKVFHKIFGEGTVVSLKGNKGEENVTIVFKTKGIKKLKL
SIAPLEIIQ
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgaatatagatctactaaatgacatgcaaaaggaagctgttataaatactgagggacca
ttacttattttagcgggtgcgggtagtggtaaaacaagagttttgactcatagaattgca
tatttgattgaagaaaaagaagtttttccgagtaatattcttgctataacatttacaaac
aaagctgctaaagaaatgagaattagggtagaaaaattaattggagaagcttcaaatgga
atgtggatgggaacttttcactcaatttgtgtaaaaattcttagaaggtatgcttcttta
attggttatgaaagagattttgttatatatgaccctacagatcaaaaaactcttgctaga
gaatgtttaaaagaattaaatattgatgagaaaaaaacaacattcagatatgttttaggt
aaaataagtgaagcgaaaaatgacatgcttactcccaaagaatatgaaaagctctatagt
ggcgatttttatttagataaagtagttaaagtttatgaattatatcaaagaaaacttata
aataataatgctatggattttgatgatttaattttaaatgcaataaaagtattaaaagaa
aatgaaaaaatactttcagattaccagagaaaatttaaatatgttttagttgatgaatat
caagatacaaataaagcgcagtatgttttagttagatatttatcgatgggatatgttaat
ttatgtgttgttggtgataatgatcaatctatctatggatggagaggcgctgatattaga
aatataagagattttgaaaaagactttccaggtgcaaaaatcattaagctagaacaaaac
tatagaagttctgtgaatatacttaacgctgcaaataatgttataaaaaataatattaat
agaaaaagcaaaaaactttggactgataatgatttgggtgaaaaaattcactattataaa
gctcaaagtgaaatggatgaagcttattttgtagttagaaatttaattgctgataagaaa
cgtaataaaagaaataatttagattatgctgttctatatagaactaatgcgcagtcacgt
gtgcttgaagatgcttttagacgtgaaggtgtttcttataaacttgttggaggtacaaaa
ttctacgatagacgtgaaataaaagattttatttcatatatgagaattattcaaaatcct
gttgatgagcttagtataaagcgtgcaattaatatacctaaacgtggaatcggtcctaaa
acaatagaaaaaattaaaggttttgcttatgaaaataatttatctttatatcaagcctta
gtttatgcagctaagaaagatttattttcaaaaaaaattaataaaggtataaaagagttt
gttactataatagaaaaatacaaaaatgatgcgcttgaaagaaaagtgtcatttttaatg
gaagacgtattaaatgatatagggtatattgaagaacttaaactcgataatacattggaa
tcaagaagtagaattgaaaacttaagagaaatgatttctgctgcaaaagaatttgaacga
acatctgaaactgggttattggcagagtttttagaagaatttagtcttagaagtgatata
gataatgtcgaggaagatgatgatagtgtgcttctaatgacacttcatagcgctaaggga
cttgaatttccaattgtttttatggttggacttgaagaagggattttcccatcaagtaga
tccttaaatgaggacgaatctgtagaagaagaaagacgtttaatgtatgtaggaataact
agagcagaagaaaaattatttattacgcattcttcaattagaagtatgtatggtaaaaca
tcttgcaatttagtaagtcgttttattgaagaaatacctagcgagcttcttgatgtacca
aaagacgaagttgcatcaagaaaaacaagaaaaacttcttttacatctcaaatgaaagca
gatttagcatataaagaaaagtcgaaatctaagatagaagatgttacggttataaaaact
ggaactaaagtatttcataaaatttttggtgaaggtacagtagtgagtttaaaagggaat
aagggtgaagaaaacgttacaattgtttttaaaacaaaagggataaaaaaattaaaatta
agtatagctccgcttgaaattatacagtaa
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