Helicovermis profundi: HLPR_23850
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Entry
HLPR_23850 CDS
T09891
Symbol
truA_2
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hprf
Helicovermis profundi
Brite
KEGG Orthology (KO) [BR:
hprf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hprf03016
]
HLPR_23850 (truA_2)
Enzymes [BR:
hprf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HLPR_23850 (truA_2)
Transfer RNA biogenesis [BR:
hprf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HLPR_23850 (truA_2)
Prokaryotic type
HLPR_23850 (truA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Acid_PPase
Motif
Other DBs
NCBI-ProteinID:
BEP30054
UniProt:
A0AAU9E5W0
LinkDB
All DBs
Position
complement(2674125..2674859)
Genome browser
AA seq
244 aa
AA seq
DB search
MNYKIKIIYDGTKYKGWQRLGNGELTIQGKIEEILTKYFRINVEIIGSSRTDAGVHAAGQ
IANFHIDKELNLQMFLKEINHYLPEDISITTISKEDERFHSRFNVSKKVYRYRIWTSSIG
DPFNRKYYYQIEDELDIDKMKSVAEVFTGIHDFTTFTNAKSKKKSMEREVYKIDIINKKS
YIDVVFTGNGFLYNMIRRMMTIIIDAGLNNINAKNARRMLEAKDRSLVKYMVPAKGLMLM
EIKY
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgaattataaaatcaaaattatctatgatggaacaaagtataagggatggcaaagactt
gggaatggagaattaactattcaaggtaaaattgaagaaattcttacaaaatattttcgt
attaacgtagagattattggaagttcaagaacggatgcgggtgttcatgctgcaggacaa
atagcaaattttcatatagataaagaactaaatctacaaatgtttttaaaagaaattaat
cattatttacccgaagatatttctattacgaccatatcaaaggaagatgaaagatttcat
tcaaggtttaatgtaagtaaaaaagtttatagatatagaatttggacatcaagtatagga
gatccctttaatagaaaatattactatcaaattgaggatgaacttgatattgataaaatg
aaaagcgtagctgaagtttttactggaatacatgattttacaacattcactaatgcaaaa
tcaaagaagaaatccatggaaagagaagtttacaaaatagatattattaataaaaaaagt
tatattgatgttgtttttacaggaaatggatttttatataatatgattagaagaatgatg
actattataattgatgcaggtttaaataatattaatgctaaaaatgcaagaaggatgctt
gaggcgaaagatagaagtttagttaaatatatggtgcctgcaaaaggattaatgttaatg
gaaatcaaatactaa
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