Candidatus Haliotispira prima: P0082_01840
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Entry
P0082_01840 CDS
T09917
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hpri
Candidatus Haliotispira prima
Pathway
hpri03030
DNA replication
hpri03430
Mismatch repair
hpri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
P0082_01840 (dnaE)
03430 Mismatch repair
P0082_01840 (dnaE)
03440 Homologous recombination
P0082_01840 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpri03032
]
P0082_01840 (dnaE)
03400 DNA repair and recombination proteins [BR:
hpri03400
]
P0082_01840 (dnaE)
Enzymes [BR:
hpri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
P0082_01840 (dnaE)
DNA replication proteins [BR:
hpri03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
P0082_01840 (dnaE)
DNA repair and recombination proteins [BR:
hpri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
P0082_01840 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WGK69626
LinkDB
All DBs
Position
442958..446545
Genome browser
AA seq
1195 aa
AA seq
DB search
MSDIASPEEVESKSRSEGEQYPFVHLHNHSDYSLLDGAVKVEWYGDRVSELGMKHIALTD
HGNLFGAIHFQNACRAKGLNPIIGCEAYIAHSHRSDKAPDPRITSRKRYHYHMVLYCKNE
TGYRNLVQLVSRSNTEGFHYKPRMDHELLVKYHEGLMASSACLGGEIPQLILANQQEEAE
KQAIFYRDLFGEGNFWLEVMRHGIPEEEVVLEAMKQISRNTGIPIIATNDVHYLRREHAE
AHDALVCIGMKKVVTSTDRKRMKLDMPEFYLKTPKQMYELFHDMPEALANTVRLAEKCDL
RLPEPGPILPIYEIPEGFSSAREFFCDLVWRSAEERYGELSADCEEGVENLGNKVYRRVE
YELKTICELDFVGYFLIVWDFIRWARENGISVGPGRGSGAGSIIAYVLGITDVEPLQYNL
LFERFLNTERVSMPDFDIDFCFERRGEVIEYVTRKYGKDNVAGICTFGTFKTKAVLKDIA
RVLDISFDESNYITSLVPDDAKNLEQALEKEPKLQEYREKGSQYQNLFDMSAILEGMSRH
VSTHACGIVIGREPISHYVPLHKDKNNTLSTQFTMDLIEPCGLVKMDFLGLKTLTLLDKI
ENLVRKRIPDFSFRNIPEDDKITFDMLGRGESRAVFQFESDGMQKILVEAKPGSIEDLIA
LNALYRPGPMQFIDRFIESKKNPGRIQYPHEDLRETLEPTYGVIVYQEQVMEVARIIGGF
SLGKADIMRRAMGKKKEKEMHSLKLEFIEGAVAKGYTKSLAEGIFEMLIPFAGYGFNKSH
AAAYSILAYKTAYSRANFPTEFMAANLTNEIGNSGAFRSYINDLDRMGINLLPPDINLSE
RHFTVDETGRSIIFGLQGIKNVGGIVVEEIVLNRTQVGLYRGFLDFMERVDSRKVNRKTL
ETLINAGVFRKADTVYNQATMLHNLDYLCHTIGKKSNDGNAGLFDDCSEEVAIQIEMKEV
SELPAGQILAGELELLSVYVSGHPLERYRRQWKRSSSLRMDRLNQTAGDKVYTVICMVRD
KRIINTKQGKTMMTLELEDFYSSINAVIFPTALNKKLEDGTSYFDFLQQNNCIGLRANLE
KRAGHSPQLIVEELFPIEKAPLKPNAELHLYVETEPGQPLLKDRQTAEDFRSLLYDYSGA
NQVFLHVRSTSPTDHSQIVEYVMELAPNIGISPSEALERDLLDSDLLPIREVEFV
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacatcgcaagcccggaagaggtggaaagcaaaagcagaagtgaaggggaacag
tatcctttcgtacacctgcacaatcattcggattattccctgttggatggtgctgtcaag
gttgaatggtacggcgaccgggtttccgagctgggcatgaagcatattgctttgacggac
cacggcaacttgtttggtgctatacattttcagaatgcttgtcgggccaaaggcctcaac
ccgattattggctgtgaggcctatatcgcccactctcatcgcagtgataaggccccggat
ccgcgcattacttcacgtaaacgctaccactatcacatggttttgtactgcaagaacgaa
acgggctatcgcaacttggtgcaattggtttcgcgttccaacaccgaaggctttcactac
aagccacgcatggatcacgagcttctggtcaaataccacgagggcttaatggcttcttcc
gcatgtttgggcggagaaatcccgcagttgattttggccaatcagcaggaagaggccgaa
aaacaagcaatcttttaccgagacctgttcggcgagggtaatttctggctggaagtaatg
cggcacggcattcccgaagaagaagttgtgttggaggccatgaaacagatatcgcggaat
accggtattccgattatcgccaccaacgatgtccactacctgaggcgggaacacgccgag
gctcatgatgccctggtctgtattggaatgaaaaaggttgtcaccagtacagatcgcaag
cgtatgaagctggatatgccggaattttatctgaagacacccaagcaaatgtatgagttg
ttccacgatatgccggaagccttggccaacacggtcaggctggcggagaaatgtgatctt
cggctgcctgaaccggggcctatcctgcccatttatgagatacccgagggcttttcttcc
gcccgggagtttttctgcgacttggtctggcgcagtgcggaagagcgctatggcgagctc
tctgcggattgtgaagagggtgtggagaacttaggcaacaaggtgtaccggcgggtcgaa
tacgagttgaaaactatttgcgagttggactttgtgggttatttcctgattgtctgggat
tttatccgctgggctcgcgagaacgggatttctgtggggccggggcggggctccggggcc
ggttcgattatcgcctacgtgctgggtatcacggacgtggaacccttgcagtacaatttg
ctgtttgaacgttttctcaatacagagcgtgtttcgatgccggacttcgatatcgacttt
tgttttgaacggcgcggtgaggtcattgagtacgtgacccggaagtacggtaaggataac
gtggccggtatttgtacttttggaaccttcaagacaaaggcagtgctcaaagatattgcc
cgggtattggatatttcgtttgacgagtccaactatatcacttcgctggtgcctgatgat
gccaagaacctggaacaggccttggaaaaagagccgaagttgcaggaataccgggagaaa
ggctctcagtaccaaaacttgtttgacatgtcggctattttggaaggcatgagccgtcat
gtttcgacccatgcctgcggcattgtgatcggccgcgagccgatcagtcactatgtgccg
ctgcacaaagataagaataacactctgtcaacccagttcaccatggatttgattgaaccc
tgtggcttggtcaaaatggattttctgggtttgaaaaccctgactttattggacaaaatt
gagaatttggtgcggaagcgtatcccggatttctcgtttcggaatatccctgaagacgat
aaaatcacttttgacatgttgggccggggcgaatcgagagcggtattccagtttgaaagt
gacgggatgcagaaaattctggtggaggccaagcccggcagtatcgaagatttgattgcc
ttgaatgctttgtaccgccccgggccgatgcaatttattgaccgatttatcgagagcaag
aaaaaccccggccggattcaatatcctcatgaagatttgcgcgagactttggaaccgacg
tacggtgtcattgtctatcaggaacaggtcatggaagtggcccggattatcggtggtttt
agcttgggcaaggccgatatcatgcgccgggccatgggcaagaaaaaagaaaaagagatg
cacagcctgaagctggaatttattgaaggggccgtggccaaaggctatactaaaagtctg
gccgaaggcatttttgaaatgttaatcccctttgccggctacggcttcaataaatcccat
gcggcagcgtattcgattttggcctataaaacggcctattcgcgggccaattttcccacc
gaatttatggcggccaacctgaccaatgagattggcaattccggtgcttttcggagctat
atcaatgatctggaccgaatgggtatcaatctgctgcctcctgacatcaatttgtcggaa
cgtcatttcaccgtggatgaaaccggacgcagcatcattttcggtttgcagggcattaag
aatgtcggtggtattgtcgtggaagagattgttctgaatcgcactcaagtcggtttatat
cgcggctttttggattttatggagcgagtggattcgcgcaaagtcaaccgtaaaacgctg
gagaccctgatcaatgccggagtttttcgcaaagcagataccgtgtacaaccaagcgacc
atgctgcacaatctggattacctgtgtcacacgattggcaagaaaagcaatgacggcaat
gccgggttgtttgacgattgcagtgaagaagtagccattcaaattgaaatgaaagaagtg
tcggaattgcctgccggtcagattctggcaggcgagttggaactgttgagtgtctatgtg
tcggggcaccctttggagcgttaccgacggcagtggaaacgctccagcagcctgcgcatg
gatcggctgaaccagactgccggagataaagtttacaccgtgatttgcatggtgcgcgac
aaacgcattatcaataccaagcagggcaaaacgatgatgacgctggagctggaagatttt
tatagcagtattaacgcggtcatttttcctacggcattgaataaaaaactggaagacggc
acaagttattttgattttctacagcagaacaactgcattgggttgcgtgccaatctggaa
aaaagggccgggcactcgccacagctcattgtggaagagttgtttcccatagagaaggct
ccgctgaaaccgaatgcggaattgcacctgtacgttgaaacggaaccggggcagccgttg
ctgaaagaccgacaaactgcggaagatttccgcagtttgctctacgattacagtggtgca
aaccaagtctttctgcatgtgcgcagcacttcaccgacagaccattcgcagattgtcgag
tacgttatggagcttgctcccaacattggtatcagcccatcggaagccttggaacgggat
ttgttagacagcgatctgttgccgatccgggaggtggagtttgtatga
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