Candidatus Haliotispira prima: P0082_04100
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Entry
P0082_04100 CDS
T09917
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
hpri
Candidatus Haliotispira prima
Brite
KEGG Orthology (KO) [BR:
hpri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpri03032
]
P0082_04100 (gyrB)
03400 DNA repair and recombination proteins [BR:
hpri03400
]
P0082_04100 (gyrB)
Enzymes [BR:
hpri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
P0082_04100 (gyrB)
DNA replication proteins [BR:
hpri03032
]
Prokaryotic type
DNA Topoisomerases
P0082_04100 (gyrB)
DNA repair and recombination proteins [BR:
hpri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
P0082_04100 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
HATPase_c_3
DUF7328
Motif
Other DBs
NCBI-ProteinID:
WGK70050
UniProt:
A0ABY8ML08
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All DBs
Position
complement(1103992..1105980)
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AA seq
662 aa
AA seq
DB search
MSDSSDSSDTQAPELGAPLSRHPEPEDHKAYDADSIQVLEGLEAVRKRPGMYIGSTGPDG
LHHLVYEIVDNSIDEALAGHCNEVTVRLQTDHYVEVQDNGRGIPTDMHPSQGVSALELVM
TRLHAGGKFEKDAYKVSGGLHGVGISVVNALSIFCEVEVHHHGKSYYQSYKTGNPDGPIR
ELGTVDGHGTRVRFRPDENIFKETIDLNYEVLSHRLRQLAYLNKGLKIHLPDERPLEQCG
TGHNRTYHYQGGLSEFILHLNEGKQPIDPTVIAFEAERESIVVEIAMQYNDGYNENIHSY
VNNINTREGGTHMAGFRAALTRTINDFMRQAQNGKKGNEPLSGEDVREGLSAVISIKIPE
PQFEGQTKTKLGNSEVRGIVESLVNEQLSDYFERNPKIIAKIIDKSLTAARARAAAKRAR
ELTRRKGFLESTRLPGKLADCADRDPSRCEIFIVEGDSAGGSAKAGRNSHIQAILPLWGK
MLNSEKTRYDKVLSNEKLQPVIAALGAGAGPDMHMSSLRYHKVIIMADADVDGSHIRCLL
LTFFFRYMRPLVEGDHVYLAMPPLFKVEKGKNLHYAYSDRERDTLLQQFPGATVQRYKGL
GEMNAEQLWETTMNPETRKIWRVKLDDLVEADHIFSVLMGDEVAPRRSFIEEHALSAEML
DI
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactcgtccgattcttccgatacgcaggcacccgaactaggtgctcccctatcc
cgacaccccgaaccggaagaccacaaggcttatgacgcagacagcattcaagtgcttgag
ggccttgaggccgtgcgcaaacgccccggtatgtatatcggctccacggggccggatggt
ttacaccacttggtttacgagattgtcgacaacagtattgatgaagccttggcaggccat
tgtaacgaagtaaccgtacgtctgcagactgaccactatgtagaagtgcaggacaatggc
cggggcatccccaccgacatgcatccgagccagggcgttagtgccttggagctggtgatg
acacgcctccacgccggcggcaaatttgaaaaagatgcctataaagtctccggtgggctg
cacggtgtaggtatttccgttgtcaacgccctttcgatattttgcgaagttgaggttcat
caccacggcaaaagttactatcaaagctacaaaaccggcaatccggacggccctataagg
gaactgggtactgtggatggccacggcacccgtgtccgtttccgcccggacgaaaatatt
ttcaaagaaaccattgatttaaattatgaagtcttatcacaccgtctgcgtcagctggcc
tacctgaataagggcctgaaaatccacctgccggacgaacggcccctcgagcagtgtggt
accggccacaacagaacttatcattaccaaggtggcctttccgaatttattctccaccta
aacgaaggcaaacagcccatcgaccctaccgtgatcgcctttgaagctgaacgcgaaagc
atcgtggtcgagatcgccatgcagtacaacgatggctacaacgaaaatatccattcttat
gtcaataacatcaacacccgagaaggtggcacacacatggccggtttccgtgcggccctg
acgcgcacgattaacgattttatgaggcaggcccaaaacggcaaaaagggcaacgaacca
ctcagcggtgaggatgtcagagaaggtctttcggctgtgatttcgataaagattcccgag
ccacagtttgagggccagaccaaaaccaaactgggcaactcggaggtacgcggtattgtc
gagtcgctggtcaatgaacaattgagtgactattttgagcgcaaccccaaaatcattgca
aaaattatcgacaagagtctgacggcggcgcgggcgcgggctgccgccaaacgagcccgt
gagttgacccgacgcaagggctttctggagtctacccgtttgccgggtaagctggccgat
tgtgccgaccgagacccttcaagatgcgagatatttattgtagagggcgattcggccgga
ggcagtgccaaggccggacgcaacagtcacatccaggctatcttaccgctgtggggcaag
atgctgaactcggaaaaaacccgctacgataaggttttgagcaacgagaagctgcaaccg
gtgatcgcagccttgggtgcgggggccggtcccgacatgcacatgagcagcctgcgttac
cacaaagtcatcatcatggcggatgcggatgtggacggatcacacatccgctgcctgctg
ctgacctttttcttccgctatatgcgtccgttggtcgaaggagaccacgtctacttggct
atgccgccactgtttaaagtggaaaaaggcaagaacctgcactatgcctacagcgaccga
gagcgagatactctgctgcaacagtttcccggtgccaccgtgcaacgctacaaaggtctg
ggtgaaatgaacgccgagcaactgtgggaaaccaccatgaacccggaaacccggaaaatc
tggcgggttaaactggacgacttggttgaggctgaccacatctttagcgtgctgatgggt
gacgaagtcgccccgcgccgcagttttatcgaagaacatgcactcagcgcagaaatgttg
gacatatag
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