Candidatus Haliotispira prima: P0082_07980
Help
Entry
P0082_07980 CDS
T09917
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hpri
Candidatus Haliotispira prima
Pathway
hpri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P0082_07980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpri03019
]
P0082_07980
03400 DNA repair and recombination proteins [BR:
hpri03400
]
P0082_07980
Enzymes [BR:
hpri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
P0082_07980
Messenger RNA biogenesis [BR:
hpri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
P0082_07980
DNA repair and recombination proteins [BR:
hpri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
P0082_07980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
HTH_40
ResIII
RecQ_Zn_bind
RQC
Helicase_RecD
GerE
AAA_22
HTH_24
Motif
Other DBs
NCBI-ProteinID:
WGK68418
LinkDB
All DBs
Position
complement(2155143..2157488)
Genome browser
AA seq
781 aa
AA seq
DB search
MNQNSLLQQYFGFHSFRTGQEEAVGHILSGCDTLVIMPTGAGKSLIYQYAALVLRQRAKD
RAAVTLVISPLIALMKDQVDSLQALGISATYINSTVSPAEQRQRSAAMLEGGYRLVYVAP
ERLRRSSFVEALKSVDIQLLVIDEAHCISSWGHDFRPDYRRIAGARKELGSPLTVALTAT
ATTLVQDDIVQLLDMPEVKRVVTGFNRPNLSFEVLYASGAHAKQQELILLLQEQFGTKRD
NTGVEACIIYAATRKEAEEVSSFVGRNLSIPCAYYHAGMAVEQRERIQNAFSTGSLAIVV
ATNAFGMGIDRQDVRLVVHYNLPGTLEAYYQEAGRAGRDGRPSRAVLLFSPQDRSLQNFF
IRQNSITSGQLYQLFQRLESLPVEGSENSESSAGGRGRLCRVPELGRSMGWEPQKLRLAL
AHLEKAGILENAEFALFGGEEGALHLVLGDWHEESAKAGIRQVEEYNSHRKSQLEQMSHY
AQADSCRRAILLSYFSDYSKAVELSADRCCDYCFRQGLREGLRRKGPAAGAEPEANLISR
LSRSERAALIVLDSVRQLAENGIRVGRQRIAQMLSGSNSQKMTAGFRAQRYYGRLGVLTG
KQIEGAINGLLQSGYLQHRNPENTDATIIALTRQGSEALELREAISLKAFDGVDGLPTQT
TQASRGLPAGQTASAGKGSTTAETLRLLESGLSPEEVARERDLNVRTISSHIGSLIEQGR
LDPDDYVSPEVRERVEKCLRQMKENGSDLSRLKPIKDTLSPSISYDEIKFVLGAWRRENG
A
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaaattctttattacaacaatactttggttttcacagttttcgcaccggacag
gaggaagcggtcgggcatattctgtccggttgcgataccttggtcattatgccgacaggg
gcggggaaatcgctgatttatcagtatgcggccttggtgctgcgtcaacgtgccaaggat
agggcggcggtcaccttggtcatttcccctttgatcgctctgatgaaagatcaggtagac
agtttgcaggctcttgggatttccgcaacatatatcaacagtactgtttcgccggctgag
cagcgacaacgcagtgccgcgatgttagaggggggctaccggttggtctatgtggctccg
gaacggctgcgccggagctcttttgttgaagcactgaagagtgtggatatccaattgttg
gtgattgatgaagcccactgtatttccagttggggacatgatttccgtccggactaccga
cgaatcgccggggcccgcaaagagctcggctctccgttgactgtggcattgacggctacc
gcaactactttggtgcaggatgacatcgtccagctattggacatgcccgaagtgaagcgt
gtggtcacgggttttaaccgtccaaacctgagttttgaagtattgtatgcttccggggct
cacgcgaaacagcaggagttaattctgctgttgcaggaacagtttgggacgaagcgggat
aataccggtgtagaagcctgtattatttatgcggcgacgcgcaaagaagcggaggaagtt
tcatcctttgtcggccgaaatttgtctataccctgtgcctactatcatgcgggcatggcg
gtagagcagcgcgagcggattcagaatgcctttagtaccggcagtctggcgattgtggtg
gcgactaacgcttttggcatgggcattgaccgtcaggatgtacgcttggtggtgcattac
aatttgcccggtactttagaggcatactatcaggaagccggccgtgccggccgggacggc
cggccctcgcgagctgtgctgctgttctcaccgcaggatcgttccctgcaaaacttcttt
atccggcagaatagcattacttcggggcagttatatcagttgttccaacgtttggagagc
ctgcctgttgagggttcggagaattccgaaagttctgcgggtgggagagggcgtttgtgt
cgggttcctgagctgggccgcagtatgggttgggagccgcagaagctgcgcttggctttg
gctcatttggaaaaagccggaatactggagaatgcggaatttgctttgttcggaggtgaa
gagggggccttgcacttggtcttgggtgattggcacgaagaaagtgccaaggccggtata
cgccaagtggaagaatacaacagtcatcgcaaaagtcagttggaacagatgagtcactat
gcccaagccgactcgtgccgccgggctattttactctcttatttcagcgattacagtaag
gccgtggagttgagtgcggatcgctgttgtgactattgtttccggcaaggattgcgtgaa
gggttgcgccggaaaggtccggccgccggagctgagccggaagctaatttgatcagccgg
ttgagccgttccgaacgagcggccttaatcgtgttggacagcgtgcggcaactggccgaa
aacggaatccgagtggggcgtcagcggattgcccaaatgctttccggctcgaattcgcag
aaaatgacggccggttttcgggcccagcgttactacgggcgtttaggggtcttgaccggg
aagcaaattgaaggggccattaatgggcttttacagtccggttatctacagcaccggaat
ccggaaaatacggatgccacaattattgctctgactcgtcagggtagcgaagctttggag
ctccgcgaggcaataagtctgaaagcctttgacggtgtggatgggcttccgactcagact
acacaggcaagcagagggttgcctgctggtcagacggcctcggcgggaaagggttcgact
acagcggaaaccttgcgcctgctggaaagtggcctgagtccagaggaagtggcccgggaa
cgggacctgaatgtgcgtactatcagttctcatattggtagtctgattgagcagggccga
ctggatccggacgattatgttagtcctgaggtgagagagcgagtggaaaagtgtttgcgg
cagatgaaagaaaatggttcggacctttcgcgtctgaagccgattaaggatactttgtct
ccgagcatcagctacgacgagattaaatttgtgctgggagcctggcgcagggaaaatggc
gcataa
DBGET
integrated database retrieval system
