Candidatus Haliotispira prima: P0082_08930
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Entry
P0082_08930 CDS
T09917
Name
(GenBank) ribonuclease catalytic domain-containing protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
hpri
Candidatus Haliotispira prima
Brite
KEGG Orthology (KO) [BR:
hpri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpri03016
]
P0082_08930
Enzymes [BR:
hpri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
P0082_08930
Transfer RNA biogenesis [BR:
hpri03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
P0082_08930
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
WHD_RNase_II
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
WGK68600
UniProt:
A0ABY8MF34
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All DBs
Position
complement(2392845..2395286)
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AA seq
813 aa
AA seq
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MFGNFDEDSLRLHPEAKLEIGSFALYRSEAAIVSDISMEKKQVKLQIQTESNKKVSVRLK
DIQLLSGSIGNASSAINRLGELTRRLSREELEDGWKLLREMGSGCSLVDLAEAVFSGSGP
CELYNAFCLINETPYFKGRPDEIMVRSSEDVSEELERKQRKQQEAERWQNFYRHYRDGQY
SDEDRPFIEEIEAIAYGEKQSCRLFREIKLESCPENAHEWLLCQQLWNERLNPYLRRSRV
AGEAPKPEQLDGDGQVLVPQWQQLWEGYRAALNGLGLCDSEEPENGNSSLQEGVPKALLQ
ALEQVVGQFCSGQVLRYPEQDLPESDLSETAKPDFWTGAATISEAIPVDTDIDAEIVAGP
GPGSENSAGDLWYCGGRRDLTRLCSWAIDDPWSTDPDDAVSLEDDAALWVHIADPASLLP
FGSPLANESMQRGATVYTPEGVSAMLPRELVQILGLGLQAVSMALSVKVRVLPSELQAAR
SLSDKSSEESLDKSSGKSSSGLRPTVEVLDLCRSWVRVRRISYGQADRLLAEDESHPLKQ
IRNLCQAHEQSRRSNGSVHFNMYNTKVVAGDPIQVEPLPNTPSRDLVAEAMLMAGAGMAR
FAHERRLPIAFLCQAPPKDVLPPLDSMANMFLARKSMSPSTVRSEAQHHSCIGVPMYTRG
TSPLRRYLDLLTHQQLHAFLLQAEGRPVRPLKTDELLYCTAQAEMQVSRVNAAQRCSQQH
WQMLYLRQEGKKRLYKAIVLDVRGGRDQGGGSRPNSGCRALCSLPEVGIETVIFSRQALS
LNQELEVQLKSVNLSRREAHFQVTGTNPAQASA
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgttcggaaattttgacgaagattcattgcgtcttcaccctgaagcgaagttggaaatt
ggttcgtttgctttgtatcggagcgaggcggctattgtcagcgatataagcatggaaaag
aagcaggtcaaactgcaaatccaaaccgagagcaataagaaagtcagcgtgaggctgaaa
gacatccaactgctttccggcagtattggcaatgcttcctccgctattaaccggctggga
gagctaacccggaggctcagccgtgaggagctggaagatggctggaagctgctccgcgaa
atggggtccggttgcagtttggtcgacttggccgaagccgtattttccggttcggggcct
tgtgaattatataacgctttttgcctgattaatgagactccttactttaagggtcggccc
gatgagattatggtgcgcagcagcgaggatgtcagcgaagagttggagcgcaaacagcgt
aagcaacaggaggctgaacgttggcagaatttctaccggcattaccgggatggccaatat
agtgacgaagatcgacccttcattgaagagattgaagctatcgcctatggcgagaagcag
agttgccggctgtttcgggagatcaagctggagtcctgcccggaaaatgctcacgaatgg
ctgctgtgtcagcaattgtggaatgagcgtctcaacccttatttgcgccgcagccgggtt
gccggggaggctcccaaaccggaacagttggacggagacgggcaggtactggtaccacaa
tggcagcaactgtgggaaggttatcgggccgcgttaaatggtctcggtctttgcgactcg
gaagagccggagaacggtaactcgtccttgcaggaaggggtgccgaaggcattattgcaa
gctttggagcaggttgtcgggcagttctgttccgggcaggtgctgcgctatccggaacag
gatttgccggagtcggatttgagtgagactgcaaagccggatttttggacgggagcagct
acgatttcggaggcgattccggttgatacagacattgatgcggagattgttgccgggccc
ggcccgggctccgagaattctgccggtgacttgtggtactgcggggggcggcgcgatctc
accaggctttgttcctgggccattgatgacccttggagcaccgacccggacgatgctgtc
agcctggaagatgatgctgccttgtgggtccacattgccgaccctgccagtctgctgcct
tttggcagcccactggccaatgaatccatgcagcgtggtgctacagtctataccccggaa
ggggtttcggccatgttgccccgagaattggtgcaaattctgggtttggggctgcaagcg
gtcagcatggccttgtcggtcaaagtccgtgtcctgccatccgaattgcaagcggcccga
tccttgtccgataaatcttccgaagagtctttagataagtcttcgggtaagtcttcctcc
gggctgagacctacggtcgaagtgctggacctttgtcgttcatgggtcagggtccggcgc
atcagctacgggcaggcggaccgattgctggcagaggatgaatcgcacccactgaagcag
atacgcaatctttgtcaggctcacgagcagtcgcgccggagcaacggctctgtgcatttt
aatatgtataacacaaaggtggtggccggcgatccgatccaagtcgaacctttgcctaac
acgccttcgcgtgacttggtggccgaggccatgttgatggccggtgccggtatggcccga
tttgcccatgagcgtcgactgcctattgctttcctgtgccaggcccctcctaaagatgtt
ctgccgccgctcgattcgatggcgaatatgtttttggcccgcaagtcgatgtcacccagc
acagtgcgcagtgaagcgcagcaccactcctgcatcggcgtgccgatgtacacgcggggt
accagtccgctgcgccgttatcttgacctgttgacccatcagcaattgcacgcttttttg
ttgcaggccgagggccgcccggtgcggcccctgaagacggatgaattattgtattgtaca
gcgcaagcggaaatgcaggttagtcgagtgaacgcagctcagcgttgttcacagcagcac
tggcagatgctgtatttacgtcaagagggcaaaaaacgcttgtacaaagctatcgtcctg
gatgttcggggagggcgggaccagggaggaggctcgcggccgaattcgggttgcagggct
ctgtgcagccttccggaagttggcatcgaaacggtaattttttccaggcaggcgttgtct
ttgaaccaagagctggaagttcagctcaaaagcgtgaatttgagccggcgcgaggctcat
tttcaggttaccggtacgaatccggcgcaggcatccgcctaa
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