Candidatus Haliotispira prima: P0082_09080
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Entry
P0082_09080 CDS
T09917
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hpri
Candidatus Haliotispira prima
Pathway
hpri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P0082_09080 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpri03019
]
P0082_09080 (pnp)
03016 Transfer RNA biogenesis [BR:
hpri03016
]
P0082_09080 (pnp)
Enzymes [BR:
hpri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
P0082_09080 (pnp)
Messenger RNA biogenesis [BR:
hpri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
P0082_09080 (pnp)
Transfer RNA biogenesis [BR:
hpri03016
]
Prokaryotic type
tRNA degradation factors
P0082_09080 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_RRP5
KH-I_KHDC4-BBP
KH_NusA_1st
RNase_II_C_S1
OB_RRP5_4th
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
WGK68630
UniProt:
A0ABY8MF59
LinkDB
All DBs
Position
complement(2431847..2433949)
Genome browser
AA seq
700 aa
AA seq
DB search
MQALSLRIGAEELNFEVGKMARQANGSVLARYGGSVVLATVCCSSETRENLDFVPVSVDY
NERYYAAGKIPGGFLKREARPKDKEILVSRLIDRPMRPLFHKSFGREIQVIPMTISTDMV
NPPDILGMNAAFASVMISDIPFNGPVAAVRVVSINGEYVINPSFEQIEASEMEIVVAGGH
NGICMVEGGAKEVSEEVMLSAIRTAESEIKRICDFMVELQQKCGKVKLPLPEGGKKDFPL
AAEIRELVTPKLQKACFEATKEERSDGIGAARAEVLASISGKLEALAAEEPAVRDLANSV
LHDVESEVVRSAILKKGLRCDGRKTDEIRQITTEIGTLPLTHGSALFTRGETQSLGVITL
GSVSDEQIMDNIDGDRRASFMLHYNFPPYSVGETGRLATGRREIGHGHLAQRSLENVLPN
KEDFPYTMRVVSEVLESNGSSSMATVCSGSMALMDAGVPIKSPVAGIAMGLITGGQGAES
EYAVLSDILGEEDHLGDMDFKVAGTKDGITGFQMDIKISGISLEIMTKALDQAREGRMHI
LGIMNSTIDEARQQTSDTAPAVLSFKVEVDKIGAVIGPGGKFIRAIAEETGAKVDIANDG
TVTIFCAQRSGALAAEARVKGMVSEPEANTVYNGTVKRIMDFGAFIEFLPGKEGLCHISK
ISKERVNSVADHLKEGQEVRVKLLEVDRMGRYNLSITDAL
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgcaagctctcagtctgcgcatcggtgcagaagaactcaatttcgaagtgggcaaaatg
gcccgtcaggccaatggctctgtcttggcccgttatggtggctctgtagttttggccacg
gtctgttgcagtagtgaaacccgtgaaaatctggattttgtacctgtatctgtcgattac
aatgaacgttactacgccgcagggaaaattcccggcggtttcttaaagcgcgaagcgcgg
cccaaggacaaagaaatcctggtctcccgtctgattgaccgcccgatgcggcctttgttc
cacaaatcctttgggcgggaaatccaagtaatacccatgactatttctaccgatatggtc
aatcctccggacatcttgggtatgaatgcggcctttgcctctgtcatgatctcagatatt
ccgttcaacggcccggtggccgcagtacgtgtggtgagtatcaacggcgaatacgtcatc
aaccccagttttgagcagattgaagcgagcgagatggagattgtggtggctggtggccac
aatggcatctgtatggtagagggcggtgccaaggaagtttccgaagaagtcatgctcagt
gccatccgaacggccgaaagcgaaatcaagcgcatctgcgacttcatggttgagttgcaa
caaaagtgtggcaaagtcaaactgcctttgcccgaaggcggcaagaaggatttcccgttg
gcggccgaaatccgtgaactggtcacaccgaagttgcaaaaggcgtgcttcgaggccact
aaagaggagcgcagtgacggcatcggagctgcgagagctgaagttctggcaagtatctca
ggcaagctggaagcgttggcggccgaagaacccgcagttcgggacttggcaaacagtgtg
ttgcacgacgtggaaagtgaagttgtacggagtgcaattctgaagaagggtctgcgctgc
gatggtcgcaaaacggatgaaatccgtcaaatcaccacggagatcggtacgcttcccctg
acgcatggctctgccctgttcacccggggtgaaacccaatctttgggtgtcattactctg
ggcagcgtttcggacgagcaaatcatggataacattgatggcgaccgccgggccagtttc
atgctgcactataatttcccgccctactcggtcggggagaccggtcgcctggccaccggt
cgacgtgagatcggtcacggtcatttggctcagcgttcactggaaaatgtgctgccaaac
aaagaagatttcccttataccatgcgtgtggtttcggaagttctcgaatccaacggttct
tcttccatggccacagtttgtagcggatcgatggctttgatggatgccggggtgccgatc
aagtctcccgtggccggtattgccatgggtctgatcacggggggacaaggggcagaatct
gagtatgcagtgctttccgacattctgggtgaagaagatcacttgggtgacatggacttt
aaagtagccggtaccaaagatggcatcacgggctttcagatggacatcaagatctcgggc
atcagtttggaaattatgaccaaggcattagaccaagccagagaaggtcgtatgcacatt
ctgggcatcatgaacagtactattgacgaagccagacagcagacctcggatacggctccg
gcggtgctcagcttcaaggttgaagtggacaaaatcggtgctgtcatcggccccggcggc
aagtttattcgggccattgccgaagagacgggtgccaaagttgacattgccaatgacgga
accgtgaccatcttttgtgcgcagcgcagcggtgcccttgccgccgaagcccgggttaaa
ggaatggttagtgaaccggaagccaatactgtctacaacggcacggtaaagcgcatcatg
gattttggtgccttcatcgagtttctgccgggcaaagagggtttgtgtcacatttccaaa
atttctaaggagcgggtcaactcggtggcggaccacctcaaagaaggccaggaagtgcgt
gtcaaattgttggaagtagaccggatgggccgctacaaccttagcatcacagacgctttg
tag
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