Halomonas profundus: LMS44_00040
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Entry
LMS44_00040 CDS
T08361
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
hpro
Halomonas profundus
Pathway
hpro00541
Biosynthesis of various nucleotide sugars
hpro01100
Metabolic pathways
hpro01250
Biosynthesis of nucleotide sugars
Module
hpro_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
hpro00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LMS44_00040 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hpro01005
]
LMS44_00040 (rfaD)
Enzymes [BR:
hpro01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
LMS44_00040 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
hpro01005
]
Core region
LMS44_00040 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
DUF6716
Motif
Other DBs
NCBI-ProteinID:
UEQ04293
LinkDB
All DBs
Position
10531..11487
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AA seq
318 aa
AA seq
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MIVVTGGAGFIGANIVKALNARGRNDVMVVDDLRDGTKFVNLADCTLADYLDKDDFLARV
KAALRGESVELPKIDAIFHEGACSDTTEWDGHYMMENNFEYSKVLLNYCEQQSIPFLYAS
SAATYGGSEVFKEVPECEKPLNVYGYSKLLFDQHVRSRWSELTTQVVGFRYFNVYGPREQ
HKGKMASVAYHNHLQIRNGETLKLFGGYDGYEAGMQSRDFVYVGDVVDVNLWFLDHPDKS
GIFNLGTGRAEPFKAIGEAVIDFYGKGEIDYIAFPEELKGRYQSYTRADIGQLRESGCDV
EFKTVAQGVKAYLGWLNG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgattgtggtaacaggcggtgccggttttatcggggccaacatagttaaagcattgaac
gcccgcggtcgaaacgatgtgatggtcgttgacgatctacgcgatggtaccaaattcgtc
aatttagccgactgcacgctggctgattatctcgataaagatgatttcctcgccagggta
aaagctgccctgcgcggtgaaagcgtcgagctacctaaaatcgatgctattttccatgaa
ggcgcctgctcggatactaccgaatgggatggccactacatgatggagaataacttcgag
tactccaaagtgctgcttaattactgcgagcagcagagtattccttttttatacgcctcg
tcagccgccacctatggcggcagcgaggtatttaaagaggtacccgaatgcgaaaagccg
cttaacgtttacggctattccaagctgctgtttgatcagcacgtgcgttcgcgctggagc
gagttaaccactcaagtagtgggctttcgttactttaatgtctatggcccccgtgaacag
cacaagggcaaaatggccagtgtggcctatcacaaccacttgcaaattcgtaatggtgaa
acgctcaagctgtttggcggctatgacggctacgaggcaggcatgcagagtcgtgacttt
gtttatgtgggcgatgtagtcgatgtgaatctttggtttttggatcatcctgacaagtca
ggaatcttcaatcttggcactggtcgggctgaaccttttaaagccattggcgaggcggtt
atcgacttttacggtaaaggtgagatcgactacattgccttccccgaagaactcaaagga
cgctatcagagctatacccgagctgacattggtcagctacgtgagagcggctgcgatgtt
gagtttaaaaccgttgctcaaggggtgaaggcctacttggggtggttaaatggctaa
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