Halomonas profundus: LMS44_00100
Help
Entry
LMS44_00100 CDS
T08361
Symbol
waaA
Name
(GenBank) lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
hpro
Halomonas profundus
Pathway
hpro00540
Lipopolysaccharide biosynthesis
hpro01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hpro00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
LMS44_00100 (waaA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hpro01005
]
LMS44_00100 (waaA)
Enzymes [BR:
hpro01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
LMS44_00100 (waaA)
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
LMS44_00100 (waaA)
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
LMS44_00100 (waaA)
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
LMS44_00100 (waaA)
Lipopolysaccharide biosynthesis proteins [BR:
hpro01005
]
Lipid A
LMS44_00100 (waaA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
Glyco_trans_1_2
U9-ORF
PELOTA_1
Motif
Other DBs
NCBI-ProteinID:
UEQ04305
LinkDB
All DBs
Position
23875..25167
Genome browser
AA seq
430 aa
AA seq
DB search
MSSPAWPRLAYSAALYALSPLIGWRIWREQVPTYSRLQRLGLRLEPLPSAPRIWLHCASV
GEVRAARPLIEGLLARYSTHSLLLTTMTATGAQQSQALISEQTPSDQARLTHRFLPLDFP
GAARRFVRSVQPELAILFETELWPNLIHACRQQGVPVAVVNGRLSPRAFKRYQRLRPLMA
STLANISWLAAKSPADAERFNALGCGTDITRIVGSLKFEIACQDKVSEESERLLQEWEGR
PVWVAGSTRDGEEALVLQAHRQLLRRYPNALLVLVPRHPQRFDEVAKLCQTESWTLSRRS
LQQPATKQTQVYLGDTLGELAVLYAAGRVAFVGGSLVPLGGHNVLEPAALGRPVLSGSSI
ENFADVAEPLQAAGALTLVDSSDALADALADYFANPERAQQAGRAGRAVIETQKGALDRT
LTGLASLLSR
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcacctgcctggcctcggcttgcctactcagcggcactgtatgcgctctcaccg
ctgattggctggcgcatatggcgtgagcaagtacccacttactcacgccttcagcggctg
ggtttacgcctcgaaccgctgccttccgcgccacgtatttggctgcactgtgcctcggtg
ggagaagtacgcgccgctcgaccgttgattgaggggctactagcgcgttattcaacgcat
agcctgctgctcactaccatgactgcgacaggtgctcagcagtctcaagcgcttattagc
gagcaaaccccaagcgatcaagcaaggcttacccatcgcttcctaccgttggattttccc
ggtgctgccagacgctttgtacgcagcgttcagcccgaacttgcgatcctgtttgaaacc
gagctgtggcccaacctgatccacgcctgtcgccagcagggtgtgccggtggcagtggtg
aatggtcgcctatcgccccgcgcctttaagcgctaccaacgcctgcgcccgctaatggcc
agcacgctcgccaatattagctggctagccgcaaaatcaccggcagatgccgaacgcttt
aatgcccttggctgcggcacggatattacacgcatcgttggttcgctgaaatttgaaata
gcttgccaagataaggtgtctgaagagagtgagcgcttacttcaagaatgggaagggcgt
ccggtttgggtagcgggctccacccgagacggcgaagaagcacttgtgcttcaagcccat
cgtcagctacttaggcgctatccgaacgcgttgctggtgctggtgcctcgtcacccccag
cgctttgatgaggtggctaaactttgccaaacagaaagctggacactaagccgccgcagc
ctacagcagcctgccacaaagcaaactcaggtttacctgggggatacgctcggtgaactg
gccgttctttatgcagcaggtcgtgtggcctttgtggggggcagcctagtgccgttgggc
gggcacaatgtgcttgaaccagcggcgctcggtaggccggtgcttagcggttcctcaatt
gagaacttcgccgatgtcgctgaaccgcttcaagcggcaggtgcgctaacgctggtcgat
agctcggatgccctggcagatgccttggcggactactttgctaaccctgagcgcgcccaa
caggctgggcgcgctggccgcgcggtgattgagacgcaaaaaggcgcacttgatcgcacc
ctgacaggattggcgtcgttactgtctcgttag
DBGET
integrated database retrieval system
