Halomonas profundus: LMS44_00780
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Entry
LMS44_00780 CDS
T08361
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hpro
Halomonas profundus
Brite
KEGG Orthology (KO) [BR:
hpro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpro03400
]
LMS44_00780 (phrB)
Enzymes [BR:
hpro01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LMS44_00780 (phrB)
DNA repair and recombination proteins [BR:
hpro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LMS44_00780 (phrB)
Prokaryotic type
LMS44_00780 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UEQ06527
LinkDB
All DBs
Position
complement(181146..182558)
Genome browser
AA seq
470 aa
AA seq
DB search
MKHQLIWLRSDLRIDDNSALAAAAVKGPVIAVFLRSIPQWQAHGHGANKLDFWARGVASV
KTALNGLNIPLLHRDIERYDQAPEVLLEIAREYDVEQLHFNHEYALNERHRDQAVQDAFK
QAGITAQGYHDAIAFAPGSLLTGKGDYYGVFTPFSKAWHKQVSADQLALRATPQVQAALD
IQSDLLPELPKLDSSPIDGQLWPAGENAAADNLARFLRFRGRHYNAQRDLPKVRGTSELS
PYLALGMISHRQCLQAVMSENGDHLADGDIGLTTWVNELVWREFYQHVAVGFPQVCRYQP
FQEHTKQLAWRDDDEGFQAWCEGRTGYPIVDAAMRQLVNTGWMHNRLRMITAMFLSKHLL
IDWRRGEAFFMRHLIDGEFCANNGGWQWAASTGTDAAPYFRIFNPTTQSTRFDADGDFIA
HWLPELAKLPAKARHAPPNDLLSDVDYPAPIVDHKAARQRALEAFKSLSK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
ataaagcatcagttgatatggctgcgcagcgacctgcgtattgacgacaacagtgccctc
gccgccgccgcggttaagggccctgtgatagcggtgtttttgcgcagcattcctcagtgg
caagcgcatggccacggcgctaataagctggatttttgggcgcgcggcgtcgctagcgtc
aaaacggcgcttaacggtttgaatattccgctgctgcatcgcgatattgaacgttatgac
caggcacccgaggtgctgcttgagatcgctcgcgaatatgatgttgagcagttgcacttc
aatcacgagtacgcgctcaatgagcgccaccgcgaccaggctgtgcaagacgccttcaaa
caggccgggattaccgcacaaggctaccacgatgccatagcgtttgcccccggcagcctg
ctaaccgggaagggcgactactacggggtatttacaccgttctccaaggcgtggcacaag
caggtcagcgctgatcagttggcgctgcgcgcgacgccacaggtacaagcggcgctggat
attcaaagcgacctgctgcctgaacttcccaagcttgatagctcccctatcgatgggcag
ctgtggccagccggtgaaaatgccgcggcggataacttagcgcgcttcctacgctttcgt
ggtcgtcactataacgcccagcgcgacctaccgaaggtgcgcggcaccagtgaactgtcg
ccctatctagcgctaggcatgatctcccatcgccaatgtttacaagcggtgatgagcgaa
aacggcgaccacttagccgatggcgatatcggccttactacctgggtcaacgagctggtc
tggcgagaattttatcagcacgtagcggtgggttttccacaggtgtgccgctaccagccc
tttcaggagcataccaagcaactagcttggcgtgacgatgacgaaggctttcaggcttgg
tgcgaggggcgtacgggatatcccattgttgatgccgccatgcgccaattagtgaacacc
ggctggatgcataaccgactgcgcatgatcacggcgatgtttttaagcaaacatctactg
attgattggcgacgcggtgaagccttttttatgcgccacttgattgacggtgaattctgc
gccaataacggcggctggcaatgggcggcctctacgggtactgatgctgcgccctacttc
cgtattttcaatcccaccacccaatccacccgttttgatgcggacggtgattttattgcc
cactggctgcctgagcttgccaaactacccgccaaagcgcgccacgcgccacctaatgat
ctgcttagcgacgtcgattatccagcgcctattgtcgatcacaaggcagcacgtcagcgc
gccttagaggcatttaaatcgctctctaaataa
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