Halomonas profundus: LMS44_01815
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Entry
LMS44_01815 CDS
T08361
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hpro
Halomonas profundus
Brite
KEGG Orthology (KO) [BR:
hpro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpro03016
]
LMS44_01815 (truB)
Enzymes [BR:
hpro01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LMS44_01815 (truB)
Transfer RNA biogenesis [BR:
hpro03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LMS44_01815 (truB)
Prokaryotic type
LMS44_01815 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
DUF6417
Motif
Other DBs
NCBI-ProteinID:
UEQ04623
LinkDB
All DBs
Position
380021..380941
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AA seq
306 aa
AA seq
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MARQRRGLPVNGVLLLDKPKGVSSNHALQRVRRLFQAQKAGHTGTLDPMATGLLPICLGE
ATKFSSHLLEADKVYRTRVELGVITDTGDAEGTIIEQHEVPSLSVDDVEAVLTRFRGEID
QVPPMYSALKHQGKKLYELAREGKQVERAARRVSVYDARLLSFEGTAFELEVSCSKGTYI
RTLAEDIGQALGCGAHISQLRRLKTGPFLADAMWTLEALEALADQAALEAELMPVDVLVD
HLPLLTVDDTAHSRLAHGQPAALETGALAADEVARLYYAETFIGLGVVKGAQEVAPKRLL
STVAIS
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcgtcaacgtcgcggtttaccggttaatggcgtactgctgctggataagcccaag
ggcgtttccagcaaccatgcgctgcagcgtgtacgtcggctgttccaggctcaaaaagcc
gggcacaccggcacgctagacccgatggcaaccggcttattgccgatttgcctaggtgaa
gcgaccaagttttcatcgcacttgctggaagccgacaaggtgtatcgcacccgggtagag
ctaggggtgatcacggataccggcgatgcagaaggcacgattattgagcagcatgaggtt
cccagcctaagcgtcgatgacgtggaagctgtgctcacccgttttcgcggtgagatcgac
caagtgccgccgatgtattcggccctcaagcatcagggcaaaaaactttacgagttggcc
cgtgaaggcaagcaggtagagcgtgcagcccggcgcgtaagcgtgtatgatgcgcgcctg
ctatcgtttgaaggcactgcttttgagctggaagtaagctgcagtaaaggcacttacatc
cgcacgttagccgaagatattggccaagcgcttggctgtggtgcgcacatcagtcaacta
aggaggctcaaaacggggccctttttagccgacgcgatgtggacgctagaggccttggaa
gcattggccgaccaagcggcactggaagctgagctcatgcccgtggatgtgttggtggac
catttaccgttactgacggtagacgacaccgcgcattctcgtttggcccatggccagccc
gctgctctcgaaaccggcgcattagccgcggacgaagtagcccgactttattacgccgag
acgtttatcggccttggcgtagtgaaaggtgctcaggaagtggcgcctaagcgactgtta
agcactgtcgctatctcgtaa
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