KEGG   Halomonas profundus: LMS44_01890
Entry
LMS44_01890       CDS       T08361                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K07713  two-component system, NtrC family, response regulator HydG
Organism
hpro  Halomonas profundus
Pathway
hpro02020  Two-component system
Brite
KEGG Orthology (KO) [BR:hpro00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LMS44_01890
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:hpro02022]
    LMS44_01890
Two-component system [BR:hpro02022]
 NtrC family
  HydH-HydG (metal tolerance)
   LMS44_01890
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 Response_reg AAA_5 AAA_2 AAA AAA_16 Mg_chelatase HTH_8 HTH_24 HTH_AsnC-type HTH_11 AAA_22 MCM DUF603 DUF815 AAA_7
Other DBs
NCBI-ProteinID: UEQ04638
LinkDB
Position
complement(395327..396721)
AA seq 464 aa
MPRILIVEDEAIIRSALKRLLERHNYTVSEAGNAEEASQLELAGFDLIISDLRLPGEPGT
SLITAAAPVPVLIMTSYASMRSAVEALKQGAVDYVAKPFDHAELLETVERILHKQSMQQS
PPPDITDAGGSRQTMIGNCVAMQKVYTRISKTAPADVTVLILGESGTGKELVARAIHQQS
KRAKAPLICVNCAAIPETLIESELFGHEKGAFTGASAARTGLVEAADGGTLFLDEIGELP
LDAQARLLRVLQEGEIRKIGSVETRHVNVRLIAATHRDLRALSKTGEFRLDLYYRLNVMQ
IELPPLREREDDVLEIADILLDKACKRHERTGLRLSRAARQDLRDYPWPGNVRELENALE
RGVILAEGHLIHPDDLGLAPTTPRPHPSSGASSTPAASGGGDKSAEENEDDLSLEDYFQH
FVLEHQDQMSETELAQKLGISRKNLWERRQRLGIPRKKTARRPG
NT seq 1395 nt   +upstreamnt  +downstreamnt
atgcccaggattctgattgttgaagatgaagcgattattcgcagcgcgctaaagcgcctt
ctggaacgccacaactatacggtcagcgaagcaggtaacgctgaggaggccagccagctt
gagctcgcagggttcgacctcatcatcagcgacctacgtctgccaggcgagccgggtacc
tcgctgatcaccgccgcggcccccgtaccggtattgatcatgaccagctacgccagcatg
cgctctgcggtggaagcgctcaaacagggggccgtggactacgttgccaagccctttgac
cacgcggagctattggagaccgttgagcggatcctgcacaagcagtcgatgcagcagagt
ccgcccccggatatcaccgatgcaggcggcagccggcaaaccatgatcggcaactgcgtt
gccatgcagaaggtctacacccgcattagtaaaaccgccccggccgatgtcaccgtattg
attcttggcgagtcaggtaccggcaaggagctggtggcacgcgccattcaccagcagagc
aagcgcgccaaggcaccattgatctgcgtcaactgcgcggcgattcctgaaacgctgatc
gaatcagagctgtttggccatgagaaaggcgcttttaccggcgccagcgctgcgcgcacc
gggttagtcgaagccgctgatggcggtacgctatttttggatgagattggtgaactaccg
ctggatgcccaggcgcgtctgctgcgcgttcttcaagagggtgaaatccgtaaaattggc
tcggtggaaacccgccacgtcaatgtccgcctgattgcagccacccatcgtgacctgcga
gcactgtcaaaaaccggcgagttccgccttgacctttactaccgactgaacgtgatgcag
atcgagctgccgccgctgcgcgagcgcgaggatgacgtgcttgagatcgccgacattctg
ctcgacaaggcgtgtaagcgccacgaacgcacgggcctgcgtttgtcccgcgcagcccgc
caggatctgcgcgactacccttggccgggtaacgttcgcgagctggagaatgcccttgag
cgcggagtgattcttgccgaggggcatctgatccatccggatgacctgggtctagcgccg
accaccccacgcccccatccgtcctctggcgcgtccagcacacctgctgccagtggtggc
ggtgataaaagtgctgaagagaatgaagatgatctctctttagaagattattttcagcac
tttgtcctcgaacaccaagaccaaatgagtgaaaccgaattggcacaaaaactgggcatt
agccgtaaaaacctttgggaacgacgccagcggcttggcataccgcgcaaaaaaaccgcc
cggcgcccaggttaa

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