Halomonas profundus: LMS44_02260
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Entry
LMS44_02260 CDS
T08361
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
hpro
Halomonas profundus
Brite
KEGG Orthology (KO) [BR:
hpro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpro03021
]
LMS44_02260 (rpoH)
Transcription machinery [BR:
hpro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LMS44_02260 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UPF0231
UCR_14kD
KORA
SWC7
Motif
Other DBs
NCBI-ProteinID:
UEQ04705
LinkDB
All DBs
Position
471839..472705
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AA seq
288 aa
AA seq
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MSTSLLPVGQLSPGGDLGGYIRAVNGISVLTADEERELAYRLYDEGDLEAARRLVLSHLR
FVVHIARSYSGYGLPQADLIQEGNVGLMKAVKRFDPNQGVRLVSFAVHWIKAEIHEFVLR
NWRIVKIATTKAQRKLFFNLRGAKKRLAWLNNDEVDAIAKDLDVKPEIVRDMEGRLSSYD
AGYDAPAGDDEESTYQAPVHFLDDSASDPATQLEDSNFEEDSTRRLQLALEGLDERSRDI
LQRRWLADSKETLHDLADVYGVSAERIRQLEKNAMKKLRQKMGEEMVA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagcactagtcttctaccggtggggcagctttcgcccggcggcgatctgggcggttac
atccgcgcagtcaatggaatttcggtattaacggccgatgaagagcgtgagctcgcttat
cgcctctatgatgaaggcgatctggaagccgctcgtcgtttggtactgtcgcatttgcgc
tttgtggtgcatatcgcgcgtagctattcgggctatgggttgccccaagcggatttgatt
caagaaggtaacgttggcttgatgaaagccgtcaagcgcttcgatccgaaccagggcgtt
cgtctggtttcgtttgccgtgcactggattaaagcagaaattcacgaatttgtgctgcgc
aactggcggatcgttaagattgccacgaccaaagcccagcgcaagctgttctttaacctg
cgcggtgcgaagaagcgtttggcgtggttgaacaacgacgaagtggacgccatcgccaaa
gatctcgacgttaagcccgagatcgtgcgcgatatggaagggcgcttgtcgtcttacgat
gcaggctatgatgctccggcaggcgatgatgaagagagcacctatcaagcgccggtgcac
ttcctggatgattccgcttccgaccctgccacgcagttggaagatagcaacttcgaggaa
gactcgacgcgccgtttgcagcttgccctcgaagggcttgatgagcgctcgcgggatatt
ctccagcgccgctggttagccgatagcaaagagacgctgcatgatctggccgacgtctac
ggcgtcagcgcggagcgtattcgccagctcgaaaaaaatgccatgaaaaagctgcgtcag
aaaatgggtgaggaaatggtcgcctaa
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