Halomonas profundus: LMS44_03210
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Entry
LMS44_03210 CDS
T08361
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
hpro
Halomonas profundus
Pathway
hpro02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hpro00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LMS44_03210
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hpro02000
]
LMS44_03210
Transporters [BR:
hpro02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
LMS44_03210
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Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_29
AAA_22
nSTAND1
AAA_16
ATP-synt_ab
Mg_chelatase
RsgA_GTPase
nSTAND3
AAA_23
APS_kinase
DUF3987
NACHT
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
UEQ04887
LinkDB
All DBs
Position
complement(678784..680424)
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AA seq
546 aa
AA seq
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MPITENQSADTVLSIRDLNIALPKGADRALAVEDVSYEVKRGEIMCVVGESGSGKSMAAN
AVMGLLPKGVHATHGEILFEGQNLLALTEKQHRALRGLKIGMIFQEPMTALNPLMRVGAQ
IAEVFEAHGQFTPKERQARALELLIEVGIPQPEKAIRAYPFELSGGQRQRVMIAMALALE
PILLIADEPTTALDVTTQAQILELIRDLQQRRGMSVMFITHDFGVVAEIANRVCVMRHGK
IVELGDAKPVLENPQDAYTQALIAAIPSNAVPPHRETSQIAPLLEIKQLNKVFRSRGGFL
KPSREVRALEDVSLTLARGETVGIVGESGSGKSTLGRCVVRLEHPDSGELLLDGVNLSQL
KGDALRRERHRVQMIFQDPYASLNPRTKVGMAIAQGPIANGTPKAAALKQAGELLDMVGL
GASAVERFPHEFSGGQRQRIGIARALALNPELIVADEAVSALDVSIQAQVLELLEELKQR
LSLSLLFITHDLRVAAHICDRIVVMQHGRIVEQGSAEQIFLAPKEAYTQALLKAIPGREA
PVAATA
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgcctattacagagaatcaatcggctgacaccgtcctcagcattcgcgacctgaacatt
gcgctccccaaaggggcggatcgcgccctggcggtggaggacgttagctacgaggtgaaa
cgcggcgaaatcatgtgcgtggtgggtgagtccggctccggcaagtcgatggccgccaac
gcggtgatggggctgctgcccaagggtgtgcacgccacccatggcgagatactcttcgag
gggcagaacctgctcgccctgacggagaagcagcaccgcgcccttcggggcctcaaaatc
ggcatgatcttccaggagccgatgaccgccctgaatccgctgatgcgggtaggtgcgcag
attgccgaggtgttcgaggcccacggccagttcacccccaaagagcgccaggcccgcgcg
ctggagctgttgatcgaagtgggtattccccagccggagaaggccattcgcgcctacccg
tttgagctttccggcggccagcgccagcgggtgatgatcgccatggcgctggcgttggag
cccattttgctgattgccgatgagcctaccacggcactggatgtcaccacgcaagcgcag
attctggagcttattcgcgaccttcagcagcggcgcggcatgtcggtgatgtttatcacc
cacgactttggcgtggtggccgaaattgccaatcgcgtttgcgtcatgcgccacggcaag
atcgtcgagctgggtgacgcaaagccggtgcttgagaatcctcaagacgcctatacccaa
gcgctgattgccgcgattcccagcaatgcagtgccgccccaccgtgaaaccagccaaatc
gccccgctgctggagatcaagcagctcaataaggtctttcgctcccggggcgggttcctt
aaaccttctcgcgaagtgcgcgcacttgaggatgtatcgctcaccttggcgcggggtgaa
acggtggggattgtaggcgaatccggttcgggcaaatccactcttgggcgctgtgtggtg
cgtttggaacaccccgacagcggcgagctgctgctcgatggggtaaacctttcccagctc
aagggcgacgcgctgcgccgggaacgccaccgcgtgcagatgatctttcaagacccttac
gcttcgctcaacccacgcaccaaagtaggcatggcgattgcccaggggccgattgccaac
ggcacccccaaagccgcggcgcttaaacaggcaggtgagctgctcgatatggtgggcttg
ggcgccagcgccgtggaacgctttcctcacgagttttctggcggccaacgccagcgcatc
ggcattgcccgtgcgctggcgctcaaccccgagctgattgtggcggacgaggccgtctcg
gcgctggatgtgtcgattcaggcccaggtgctggagctcctggaggagcttaaacagcgg
ctttcgttatcgctgctgtttatcacccacgacctccgcgtcgccgcgcatatctgcgac
cgcatagtggtgatgcagcatggccgcatcgtcgagcaaggcagcgccgagcagatcttc
ctcgccccaaaagaggcgtatacccaggcgctgctcaaggcaattcccggccgcgaagcg
cccgtggcggccactgcgtaa
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