Halomonas profundus: LMS44_05960
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Entry
LMS44_05960 CDS
T08361
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
hpro
Halomonas profundus
Brite
KEGG Orthology (KO) [BR:
hpro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hpro03000
]
LMS44_05960
Transcription factors [BR:
hpro03000
]
Prokaryotic type
Helix-turn-helix
LysR family
LMS44_05960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
HTH_30
HTH_5
PBP_like_2
HTH_20
HTH_24
Motif
Other DBs
NCBI-ProteinID:
UEQ05413
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Position
1312774..1313733
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AA seq
319 aa
AA seq
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MKVRQLTFRLLQVYADVVRTGSLTATANRLHLTQPTVSQQLKRLREIVGEPIVRHEEGRL
VPTEVGQALYQLSQDLLSRADVFSQYLEEYNSGGRGHFSIGLVNTAQYVLPRLLGPFGQA
NPQVDVTVEIGNRQQMLNRFERHEDDIYVFSHPPIDDDVLAAPFLSNPLVVVGPQHCRWA
GVEGLSMDALKEERFLLREPGSATRHTFEAWLYSAGIELRSTQQVASNEAIRLAVASNMG
LAVLSRHVVADSPNGVQELPLQGFPLKSRWHFVVRRQRRLPPAAIRFLSYVQASLAQAFD
EPEGEMAVAELLQALKPER
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtacgacaactcacttttcgcttgctacaggtctatgccgacgtggttcgcaca
ggctcactgacggccacggcaaatcggctccacctgacccaacccacggtgtctcagcag
ctaaagcggctgagagaaattgtcggtgaaccgattgtgcgccacgaggaagggcgcctg
gtgcccactgaggttggtcaggcgctttatcaactcagccaggacttgcttagccgtgct
gatgtgtttagtcagtacctggaggagtacaacagcggagggcgcggacacttcagtatc
ggcttggtgaacaccgcgcaatatgtactgccacggctgttagggccgtttggtcaggct
aacccccaggtagatgtcacggtggagataggtaatcgccagcagatgctcaatcgtttt
gagcgccatgaggatgatatctacgtatttagccacccgcccattgatgacgatgtgtta
gccgcgccttttctgagcaatccattggtagtggtggggccgcagcattgccgctgggca
ggcgtagaaggtctcagcatggacgcactcaaagaggagcgatttctgctgcgcgaaccg
ggctctgcgactcggcatacctttgaagcctggctgtacagtgcgggtattgagctacgc
tctacccagcaggtcgccagtaacgaggctattcggctagcggtggcgtcaaacatgggt
ctagcggtgctgtctcgccacgttgttgcagattcgcccaacggcgtccaagagctgccg
ttgcagggctttccgctgaaaagtcgttggcactttgtggtcagacggcaacgccgctta
ccccccgccgccattcgttttttgagctatgtacaagcttcgctggcacaagcgtttgac
gagcccgaaggggagatggccgtggctgaattgctccaagccttaaagcctgaacgctga
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