Halomonas profundus: LMS44_06885
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Entry
LMS44_06885 CDS
T08361
Name
(GenBank) LysR family transcriptional regulator
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
hpro
Halomonas profundus
Brite
KEGG Orthology (KO) [BR:
hpro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hpro03000
]
LMS44_06885
Transcription factors [BR:
hpro03000
]
Prokaryotic type
Helix-turn-helix
LysR family
LMS44_06885
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_24
PBP_like
Motif
Other DBs
NCBI-ProteinID:
UEQ05582
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Position
complement(1508217..1509101)
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AA seq
294 aa
AA seq
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MNPSIQQLRVFVAVAHSRSLAEASERVHLSQPAISIALRKLEENVGGALFARTTRQLALT
PEGEAFLPVAVRLLNDWNEAFEDLNDQFSKQRGKVTVAALPTLAAGLFPRVIKLFHEAYP
RINLSLHDVLADQINQMVREGRADLGLSVPPSDADDLTFDPVLEDSYVVVCPCGHPLLAQ
SAVAWSQLAAYPFIGINRLSSSRQDIDRIMQSVGERLDILCDARQIATVGRMVAAGLGIS
VLPSLSFRQIAADGIEYRPLVEPTIRRELGIILSRRHPPSAATSALRELIHHHE
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgaatccaagcatccagcagttgcgtgtttttgttgccgtcgcccactcgcgcagcctt
gcagaggccagcgagcgcgtgcacctttcccaaccggcgatttcgatcgccctgcgtaaa
cttgaggagaacgtcggtggtgcactgtttgcccgtaccacgcggcagctcgcgttaaca
ccggaaggcgaagcctttctgcccgttgccgtgcggctcctgaatgattggaacgaagcc
tttgaggatctcaacgaccaattttccaaacagcgcggaaaggtaaccgtggccgccctg
cctactctggcggcaggactattcccgcgggtcattaagctttttcacgaggcttaccca
cgtattaacctcagcctgcacgatgtgctggccgatcaaatcaatcaaatggtgcgcgaa
ggtcgcgccgacctgggtctttccgtgccgccaagcgacgcagacgacttgacgtttgac
cccgtcctcgaagacagctatgtggtcgtttgcccctgcgggcatccattgctggcgcaa
tcagccgtcgcctggagccaactcgcggcttatccatttattggtatcaatcgcctttcc
agctcgcgccaggatattgaccgcattatgcagagcgtaggagaacggctggatatcttg
tgcgatgcgcgccagatcgccacggtaggccgcatggtagctgcgggattaggtattagc
gtgctgccctcgctcagttttcggcaaattgccgccgatggtattgagtaccgcccgctg
gtggagccgaccattcgccgtgagctgggcattatattgagccgccgtcaccctccatcc
gccgccaccagcgccctgcgcgagctaattcatcaccatgaataa
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