Halomonas profundus: LMS44_07270
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Entry
LMS44_07270 CDS
T08361
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
hpro
Halomonas profundus
Brite
KEGG Orthology (KO) [BR:
hpro00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
LMS44_07270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
HHH_7
YqgF
T2SSK
S1_RRP5
HHH_6
RuvX
LppA
Motif
Other DBs
NCBI-ProteinID:
UEQ05657
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Position
1612997..1615366
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AA seq
789 aa
AA seq
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MDVNQRIISRLATELGVRPEQVSATVELLDGGATVPFIARYRKEVTGALDDIQLRQLDER
LRYLRELEERRAAVLVAIDEQGKLDATLKASIDAAETKQRLEDLYLPFKKKRRTKAQIAR
EAGLEPLADALLADPTLNPESEAENYLRPAEGDIPAIEDAKAALDGAKQILMERFAEDPE
LIGQLRERLWQEGQLSARVLEGKQQEGAKFSDYFEHDEKLAKAPSHRALAMFRARNEGVL
SLSIRLPGEDEAPIHPAQLAIAKQFGISDQGRPADKWLAEVVRWTWRVKLYTALETELLG
RLREQAELTAIEVFAANLKDLLLAAPAGQKVTLAIDPGQRTGCKVAVIDATGQFVDHTTI
YPHAPQNQWNEALSVLAKLVKQYGVELIAVGNGTASRETDKLAGELLKALAPAHRLSKVM
VSEAGASVYSASEYASREMPDLDVTVRGAVSIGRRLQDPLAELVKIEPKSIGVGQYQHDV
SQVQLSRSLEVVIEDCVNAVGVDLNTASSALLSRVAGLSAALAENIVAQRNVKGAFKSRK
ELLEVSRLGAKTFEQCAGFLRIHNADNPLDASAVHPEAYPLVERIAKQSGREVRGLIGDS
AALKALKPADFADERFGVPTVSDILKELDKPGRDPRPEFKAAEFREGVETLNDLKLSMVL
EGTVTNVTHFGAFVDIGVHQDGLVHISALSDRFIDDPRSVVKAGDIVTVKVMSIDIPRKR
VGLSMRLDDQPEAENGANSGANKNSGSPKDQHSGARKPARNQRNNANKTEAPEPMGALGA
ALLKARGGK
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcaatcagcgtattatttcccgcctggccactgagcttggtgtgcgtcccgag
caagtgtccgccacggtggagctgctggatggcggcgccacagtgcccttcattgcccgt
taccgtaaagaagtcaccggcgcgctggacgatatccagctgcgccagttggatgaacgg
cttcgctatctgcgtgagttggaagagcgccgcgccgcggtacttgtcgccattgatgag
cagggcaagctcgatgctacgctgaaagccagcatcgacgctgccgagaccaagcaacgc
ttggaagatttatacctgccgtttaagaaaaaacgccgcaccaaagcgcaaatcgctcgc
gaagcagggcttgagccgctggcggatgcgctgcttgccgatccaacgcttaatccggaa
agcgaagcggaaaactatctgcgcccagcagaaggcgatattcctgccatcgaagatgcc
aaggccgctctggatggcgccaagcagatcttgatggagcgcttcgccgaggatcccgag
ctcatcggccaactgcgcgaacggctgtggcaagagggccagctcagcgcccgtgtgctg
gagggtaagcagcaggagggcgccaagttctccgactatttcgagcacgatgagaaactc
gccaaagcgccatcacaccgcgctttggcaatgttccgggcgcgtaacgaaggcgtgttg
agcctgtcgattcgactgcccggcgaagacgaggcccccattcaccccgcccagttggcg
attgccaagcagtttggcatcagcgaccagggccgcccggcggataagtggttagccgaa
gtggtgcgctggacctggcgggtgaagctctatacagcactggagaccgagctgctgggc
cgcctgcgcgaacaggctgagctcaccgccattgaagtgtttgcggctaatctaaaagac
ctgctgctagccgcgccggcggggcagaaagtcacccttgccatcgaccccggccagcgc
accggctgtaaggtcgcggtgatcgatgccactgggcaatttgtcgatcacaccactatc
tatccccatgcgccgcaaaaccagtggaatgaagccttgagcgtgctggctaagctggtg
aaacagtacggcgtcgagctgattgcggtgggcaatggtaccgccagtcgtgaaactgac
aagctcgcgggcgaactactaaaagccctggcgccagcgcaccggttaagcaaagtgatg
gtctctgaagcgggcgcctcggtctactctgcctctgaatacgcctcgcgggaaatgccg
gatcttgatgtgacggtgcgcggtgccgtctctattggtcgccgcctgcaggatccgctg
gccgaactggttaaaattgagcccaagtcgattggcgtaggccaataccagcacgatgtc
tcccaggtgcagctgtcgcgtagtctggaagtcgtcattgaggactgtgttaacgccgtg
ggcgtcgacttgaataccgcttccagcgcactgctctcacgggtagctggtctgagcgct
gcgctggccgaaaatatcgttgctcagcgcaatgtcaaaggcgctttcaaaagccgtaaa
gaattgttagaagtgagccgccttggtgccaaaaccttcgagcagtgtgcgggtttcctg
cgtatccacaatgccgataaccccttggatgccagcgccgttcacccggaagcctaccca
ctggtggaacgtatcgccaagcagagcgggcgtgaagtacgcggcttgattggcgacagc
gccgcgttgaaagccttaaagcccgccgattttgccgatgagcgtttcggcgtgcccacc
gtcagcgatattctcaaagaactggataaacctggtcgcgaccctcgccctgagtttaaa
gcggccgaattccgcgaaggtgtcgaaacccttaatgacctcaagctttccatggtgctc
gaaggcacagtcaccaatgtgacccacttcggcgcttttgtggatatcggtgtccatcag
gacggcctggtacatatctcggcgctatctgatcgctttatcgatgacccccgcagcgtg
gtgaaagcaggtgatattgtcaccgttaaagtgatgagcattgatatcccccgcaaacgg
gtaggtctatcgatgcgtttggatgaccagcctgaggctgaaaacggtgctaacagcggt
gccaataagaacagtggctcgcctaaagatcaacacagtggtgcccgtaaaccggctcga
aaccagcgtaataacgctaataaaactgaagcgccggagcctatgggggcgctgggtgct
gcgctgttgaaagcgcgtggcggcaaatag
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