Halomonas profundus: LMS44_07395
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Entry
LMS44_07395 CDS
T08361
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
hpro
Halomonas profundus
Pathway
hpro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LMS44_07395 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpro03019
]
LMS44_07395 (rppH)
Messenger RNA biogenesis [BR:
hpro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LMS44_07395 (rppH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
UEQ05682
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All DBs
Position
1641848..1642339
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AA seq
163 aa
AA seq
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MIDADGFRPNVGIIIANSQGQLLWARRVGQNAWQFPQGGINASETPQQALFRELYEEIGL
TADDVDIVACTRGWLRYRLPRRMIRTHSRPVCIGQKQKWFLLKIRCQESQICMTATPTPE
FDGWRWVSYWYPLGQVVPFKREVYRRALRELSPRVQRLAQDDD
NT seq
492 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgacgctgacggctttcgccccaatgttggcatcatcattgccaatagccagggg
cagctgctttgggcgcgtcgggtaggacaaaatgcgtggcaatttccccaggggggcatc
aatgcaagcgagacgccacaacaagcactttttcgtgaactttacgaagagatcggccta
accgccgacgatgttgatattgttgcctgcacccggggctggctacgctaccgtctgcca
cgacgtatgattcgcacacattcgcgtccggtctgtataggccagaagcagaagtggttt
ttacttaaaatccgttgccaggaaagccagatttgtatgacggcaaccccaacccccgag
tttgatgggtggcgttgggtgagctactggtacccgctagggcaggtagtgccttttaaa
cgagaggtatatcggcgcgcgctgcgggagttgtctccccgcgttcagcgtctggcacag
gatgacgattag
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