Halomonas profundus: LMS44_07520
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Entry
LMS44_07520 CDS
T08361
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
hpro
Halomonas profundus
Pathway
hpro00521
Streptomycin biosynthesis
hpro00523
Polyketide sugar unit biosynthesis
hpro00541
Biosynthesis of various nucleotide sugars
hpro01100
Metabolic pathways
hpro01110
Biosynthesis of secondary metabolites
hpro01250
Biosynthesis of nucleotide sugars
Module
hpro_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
hpro00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LMS44_07520 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LMS44_07520 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LMS44_07520 (rfbC)
Enzymes [BR:
hpro01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LMS44_07520 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Polysacc_synt_C
Alpha_kinase
Motif
Other DBs
NCBI-ProteinID:
UEQ05705
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Position
1666590..1667138
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AA seq
182 aa
AA seq
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MHYEKLAIPDLVLLTPKVFGDERGFFMETFRQNEFETHCGNYQFVQDNHSKSVQGILRGL
HYQYKQPQGKLVRVTQGEVFDVAVDMRKSSPTFGQWVGVTLSEENKQLLWVPPGFAHGFY
VTSGTAEFQYKCTDYYAPGDEVSISWNDPHLAIEWPLVEGKSPQVSDKDADGVPLNEAPQ
FT
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgcactacgaaaaactcgccattcccgatctagtcctgctcactcccaaagtatttggc
gacgagcggggcttcttcatggaaacctttcgccaaaacgaatttgaaacccactgtggc
aactaccagttcgttcaggacaaccacagcaagtccgttcaaggtattttgcggggcctg
cactaccaatataagcagccccagggaaagctagtacgcgtcacccaaggcgaagtattc
gatgtcgccgttgatatgcgcaagagttcaccgacgttcggccagtgggtaggggtaacc
ttaagcgaagagaacaagcagttgctgtgggtgccacctgggtttgcccacggcttttac
gtgaccagcggaacagccgagttccagtacaaatgtacggattactacgcgcctggtgac
gaagtgagcattagctggaatgacccccatcttgcgattgagtggccgctagtagagggt
aaatcgccccaggtatcagataaagatgccgatggtgtgccgcttaacgaagccccacaa
tttacataa
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