Halomonas profundus: LMS44_08590
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Entry
LMS44_08590 CDS
T08361
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
hpro
Halomonas profundus
Brite
KEGG Orthology (KO) [BR:
hpro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpro03019
]
LMS44_08590 (rapZ)
Messenger RNA biogenesis [BR:
hpro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LMS44_08590 (rapZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_22
FtsK_SpoIIIE
AAA_21
AAA_16
AAA_23
SKI
CoaE
AAA_29
Motif
Other DBs
NCBI-ProteinID:
UEQ05914
LinkDB
All DBs
Position
complement(1937104..1938036)
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AA seq
310 aa
AA seq
DB search
MQLVIISGRSGSGKSIALQALEDLGYYAIDNLPAMLLGSLVDELRDQGDRAHLAVSIDAR
NLPGALERLPSLLDELRQRKIVFQVIYLTTDARILLERYSATRRRHPLTRDSEMTLEEAI
NKEETTLEDIRDLADLLIDTSRLSVHDLRRRITDQVAHQRRDKLTLTLESFGYKRGVPLD
ADLVFDVRCLPNPYWDPTLRQFTGRDAEIVAFLNSYPIVDAMSDDILAWLERWLPAYQNS
QRSYMTIAIGCTGGQHRSVYMAEKLAEKLTPSMGEVQLRHRELGLHYTISEQLAAPLVSA
STPNERPETS
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcaactggtgatcattagcggccgctccgggtcaggtaaatctatcgccttgcaagcg
ctggaagatcttggctactacgcgattgataacctcccagctatgttgctggggtcgttg
gtggatgaactgcgtgaccagggcgaccgagcacatttagcggtgagtattgatgcccgc
aatttgccgggagctctggagcgcctgccctctttattagacgagttgcgccagcgtaaa
atcgtctttcaagttatttacctgaccaccgatgcgcgcatactgcttgagcgttactca
gcaacgcgtcgccgtcatccgctgacccgcgatagcgaaatgacgctggaagaggcgatc
aataaagaagagacgacgctagaggatattcgcgatctggccgatctattgatcgataca
tcacgattatcggtgcacgatttacgccgtcgcattaccgaccaagtagcccatcagcgg
cgcgacaagctgacgctaacgctggaatcgtttgggtataaacgcggcgtaccgttagac
gccgacctggtcttcgatgtgcgctgcctgccaaatccgtactgggatccaacgctgcgc
cagttcactggccgcgacgcggaaatcgtggcttttttgaacagctatccgattgttgat
gccatgagcgacgacatcttggcctggctagagcgttggctacccgcttaccagaatagc
caacgtagctacatgactatcgcgattggctgtactggtggccagcaccgctcggtctat
atggccgagaagttagcggaaaaattgactcctagcatgggcgaagttcaacttcgccac
cgcgaactgggtctgcactacaccataagcgaacagttggccgctcccctcgtcagcgct
tccacacctaacgagcggccagagacctcttaa
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