Halomonas profundus: LMS44_09190
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Entry
LMS44_09190 CDS
T08361
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
hpro
Halomonas profundus
Pathway
hpro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LMS44_09190 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpro03400
]
LMS44_09190 (recO)
DNA repair and recombination proteins [BR:
hpro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LMS44_09190 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LMS44_09190 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
UEQ06030
LinkDB
All DBs
Position
2058530..2059225
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AA seq
231 aa
AA seq
DB search
MSPEPAFLLHRRPYRETSALVDLLTLDHGRVRAVAHGGQRPGSKSRQRLQPFTPLFVTWQ
GSRDLKRLTLMESRGQTALLAGEGLLCGLYANEIATRLLPLELPAPDVFAFYTALLEALP
APAERALALRRYEWALLEALEATPQFATPEGSVLDPQLRYRFDTASRAFIPAERGLDGRT
LRYIEQGDWQHEGLANALKAVMRAALAPHLGTTVLRSRELMLDLARRRYRP
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccagagccggcttttttactccaccgtcggccatatcgtgaaaccagtgcgctg
gtggatctattaacgcttgatcacggcagagtgcgtgctgtggcccatggcgggcaaagg
cccggttctaaatcgcgccaacgcctgcagccgtttacgccgctgttcgtgacctggcag
ggcagccgcgatttaaagcggctaacgttgatggagtctcgcggccagacggcgctgttg
gccggggaggggttgctgtgcgggctttacgccaatgagatcgccacccggctgctgccg
ttagaactgccggcgcctgacgttttcgcgttttataccgcgctactggaagcactgcca
gcgccagcggagcgcgcattagcgctccgccgctatgagtgggcgctgttagaggcgctc
gaggccacgccgcagtttgcgacaccagaaggtagcgttttggatcctcagctccgctac
cgttttgacaccgccagccgggcattcatacctgctgagcgtggcctcgacggcaggacg
ttacgttacattgagcagggtgattggcaacatgaaggccttgccaatgcattaaaggcg
gtaatgcgagcggcgctggcaccccatcttggcaccaccgttttgcgttcgcgagaactg
atgctcgatttagctcggcgtcgctatcgtccctga
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