Halomonas profundus: LMS44_10035
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Entry
LMS44_10035 CDS
T08361
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hpro
Halomonas profundus
Pathway
hpro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LMS44_10035 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpro03019
]
LMS44_10035 (groL)
03110 Chaperones and folding catalysts [BR:
hpro03110
]
LMS44_10035 (groL)
03029 Mitochondrial biogenesis [BR:
hpro03029
]
LMS44_10035 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hpro04147
]
LMS44_10035 (groL)
Enzymes [BR:
hpro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LMS44_10035 (groL)
Messenger RNA biogenesis [BR:
hpro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LMS44_10035 (groL)
Chaperones and folding catalysts [BR:
hpro03110
]
Heat shock proteins
HSP60 / Chaperonin
LMS44_10035 (groL)
Mitochondrial biogenesis [BR:
hpro03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LMS44_10035 (groL)
Exosome [BR:
hpro04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LMS44_10035 (groL)
Exosomal proteins of other body fluids (saliva and urine)
LMS44_10035 (groL)
Exosomal proteins of breast cancer cells
LMS44_10035 (groL)
Exosomal proteins of colorectal cancer cells
LMS44_10035 (groL)
Exosomal proteins of bladder cancer cells
LMS44_10035 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
UEQ06188
LinkDB
All DBs
Position
complement(2250705..2252348)
Genome browser
AA seq
547 aa
AA seq
DB search
MSAKQVKFSDDARKRMARGVDVLANAVKVTLGPKGRNVVLEKSFGSPTVTKDGVSVAKEI
ELKDKFENMGAQMVKEVASQTSDAAGDGTTTATVLAQAIIAEGLKGVTAGMNPMDLKRGI
DQAVNAAVKEIKAMSVPCTDTKSIAQVGTISANGDKRIGEIIAEAMEKVGKEGVITVDEG
RGFEDELEVVEGMQFDRGYLSPYFVTNQDTMTVELEDPYILLVDKKISNIRELLPVLEAV
AKQGKPLAIIAEDIEGEALATLVVNNMRGIVKVAAAKAPGFGDRRKSMLQDIAILTNGTV
ISEEVGLTLEQANLDHLGTAKRMTMSKENTTIIDGAGAEGDIEARVSQIRAQIEDTSSDY
DKEKLQERVAKLAGGVAVIRVGAATEVEMKEKKARVEDALHSTRAAVEEGVVPGGGTALV
RVMAKVQGLTGDNEDQNHGINMALRAMQSPLRQIVSNAGEEPAVVINRVKDGEGNFGYNA
QTGEYGDLFEMGVLDPAKVTRTALQSAGSVAGLMITTECMIAEDPEEKDAAPDMGGMGGM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctaaacaagttaagttctccgatgatgctcgtaaacgcatggcccgcggtgtc
gacgttctcgccaacgcggtaaaagttaccctcggcccgaaaggccgtaacgtagtactg
gaaaaatctttcggctcccccaccgttactaaagacggtgtttctgttgccaaagagatc
gaactgaaagacaagttcgaaaacatgggcgcccagatggttaaagaagtcgcctcacag
acttctgacgctgctggtgacggtactactaccgctaccgttttggcccaggccattatc
gctgaaggcctgaaaggcgtaacagcgggcatgaacccgatggatcttaagcgcggcatc
gaccaagcggtcaacgctgcggttaaagaaatcaaagccatgtcggtaccttgcaccgat
accaagtcgattgctcaggtaggcactatctctgcaaacggcgacaaacgcatcggtgaa
atcatcgccgaagcgatggaaaaagtcggcaaagaaggcgtcatcaccgttgatgaaggc
cgtggctttgaagacgagctggaagtcgttgaaggtatgcagtttgaccgcggctacctc
tcgccctactttgttaccaaccaggacaccatgacggttgaactggaagatccctacatc
ctgctagtggataaaaagatctccaacatccgtgagctgctgccggtgctagaagccgtt
gccaagcaaggcaagccactggccatcatcgctgaagatatcgaaggcgaagccctggca
acgttggttgtaaacaacatgcgcggtatcgttaaagtagccgctgctaaagcaccgggc
ttcggcgaccgtcgtaagtccatgctgcaggatatcgctattctgactaacggcacggtc
atttctgaagaagtcggcctgacgcttgagcaagccaacctggatcacctgggtactgct
aagcgcatgacgatgtctaaagaaaacaccactatcatcgatggtgctggtgcagaaggc
gatatcgaagcacgcgttagccagatccgcgcgcaaatcgaagacacctcttctgactat
gacaaagagaaactgcaagagcgcgttgccaaactggcaggcggtgttgccgttatccgc
gtcggtgctgccaccgaagtggaaatgaaagagaagaaagcccgtgttgaagacgctctg
cactctactcgtgcagccgttgaagaaggcgtggtgccaggtggcggtacagcactggtt
cgcgtaatggccaaagtacagggccttactggcgataacgaagaccagaatcacggtatc
aacatggcgctacgcgctatgcagtcaccactgcgtcaaatcgtttccaacgctggtgaa
gagcctgccgttgtgattaaccgtgtgaaagatggcgaaggcaacttcggctacaacgca
caaaccggtgagtatggcgacctgtttgaaatgggcgtcctggatccagcgaaagtaacc
cgtactgcactgcagtccgctggttctgttgctggcctgatgatcaccactgagtgcatg
atcgcagaagaccctgaagagaaagacgctgcacctgatatgggtggcatgggcggaatg
ggtggtatgggcggcatgatgtaa
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