Halomonas profundus: LMS44_10180
Help
Entry
LMS44_10180 CDS
T08361
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hpro
Halomonas profundus
Pathway
hpro03030
DNA replication
hpro03430
Mismatch repair
hpro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LMS44_10180
03430 Mismatch repair
LMS44_10180
03440 Homologous recombination
LMS44_10180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpro03032
]
LMS44_10180
03400 DNA repair and recombination proteins [BR:
hpro03400
]
LMS44_10180
Enzymes [BR:
hpro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LMS44_10180
DNA replication proteins [BR:
hpro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LMS44_10180
DNA repair and recombination proteins [BR:
hpro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LMS44_10180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Rv2179c-like
PAS_4
MASE1
Motif
Other DBs
NCBI-ProteinID:
UEQ06216
LinkDB
All DBs
Position
complement(2282389..2284449)
Genome browser
AA seq
686 aa
AA seq
DB search
MTRGGLPKRQRLIGLWLLLSGISLLGGAIFAAWLDAKLAPTGVTRIALWLGSFSGGATIF
LVGLLLERMLFTPLRHLQVQLARLVANPDARDEHPPEGWLKGLGPDLRRVRESWRSDRSR
LATAHADGARSAARIRQELETLLQVLETPLLLCDHHRRLMLFNQAAEDFFEGNTGLGLGK
RLEALLPVVSLQQMLGQLPNDGSPRELLAPCDDRWLKVILRRVPGSDGETLLTFSDATAS
WSSEMGVRAELAAMLTPLRQHTASLTSAADALIQLRDQNDASTSSLRQRFERVIHEEGVT
LGDNVAKIGQLLDDMQHQGERLTPMWSNDFWQALDERLDPEHRLITPVGMPAWFKGDAPA
LIALFDSLVKHLNTHLPDSGFEGEMCLGNKRVYLDLIWRGKAIPEHELAEWRQQPLNSLP
LTPSVADVLRQHASDIWSLADDDGVHSRLRLPLPAMERVGAPRETAPPRPEFHDFGIADL
PPPDEALASRTLRSLEIVAFDTETTGLELRRGDTVISLGACRVVNARLLASEVFDQKVDP
QRPIPPASTAIHGLTDADVIGAPPLDIVLTRFRDYVGEAVLLAHNAAFDLLAISHKGVAF
DIPVIDTLLISRALDEALDGHDLDSLAQRYDLAFPPGTRHTALGDARVTAELWLALLPRL
EARGVDTLEQLLALQANAFDRQDASA
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgacccgaggcgggctgcccaagcgtcagcgcctgattggcctctggttgctacttagc
ggcatcagcctgctgggtggagccattttcgccgcttggctggatgccaagcttgctccc
acaggcgtaacgcgcatcgctctctggctaggcagtttctccggtggcgcgacgattttt
ttagtcggtttgctgcttgagcgcatgctgtttaccccgctgcgccatttacaggtgcag
ctggcacgcctggtcgccaacccggacgcccgagacgagcacccacccgaaggttggtta
aaaggattggggcccgacctacgtcgagtacgcgaaagctggcgatcagatcgcagtcgc
cttgccactgcccacgctgacggcgcccgcagcgctgcacgtattcgtcaggagctggaa
acgctgctgcaagtgctcgaaacaccgctgctactgtgtgatcaccaccgccggctcatg
ctgttcaatcaggcagccgaggacttctttgagggtaataccgggttagggctgggtaaa
cgcctggaggcgctgctgccagtagtaagcttacagcaaatgctcggtcaactgcctaat
gacggctccccgcgggagttactcgctccctgtgatgaccgctggctcaaagtcatttta
cgccgcgtaccgggtagcgatggcgaaacactgctgacttttagtgacgccaccgcctct
tggtcgagcgaaatgggcgttagagcggaactggcggccatgctgaccccgcttcgccag
cataccgccagcctgaccagcgctgctgatgcgctgatacagctgcgcgatcaaaatgac
gccagtacatcctctttacgccagcgttttgagcgggtaatccacgaggaaggcgttacg
cttggcgacaacgtggctaaaatcggccagctactcgacgacatgcaacaccagggcgag
cgcttgacgcccatgtggtcaaacgatttctggcaagcgttggatgagcgtcttgatccg
gagcaccgcctaatcaccccggtgggcatgccagcctggtttaaaggcgacgctccggca
ctcattgcgctgttcgactctttagtcaaacacctcaatacccatctgcctgacagtggc
tttgagggtgagatgtgcctgggcaataagcgcgtctatctcgaccttatttggcgtggc
aaagcaatccctgaacacgaactggcggagtggcgccagcagccgctaaactccctgcca
ttgacgccaagcgtcgcggatgtgctgcgtcaacacgccagcgacatctggagccttgcc
gacgatgacggcgttcattcacgcctgcgactccccctgcccgccatggagcgcgtcggc
gccccacgcgaaaccgccccgccgcgccctgaattccatgactttggcattgccgacctg
cctccaccagatgaagcgctggccagccgaacactgcgcagcctggaaatagtcgccttt
gatacggaaaccaccgggcttgagctacgccgaggcgacaccgtcatcagtcttggcgcc
tgccgcgtggtcaacgcccgtttattggcaagcgaggtcttcgatcaaaaagttgatccg
cagcggccgatcccgccggctagcaccgcgattcacggccttaccgatgccgatgtgatc
ggtgcgccaccgctggatattgtgcttacccgctttcgtgattatgtcggcgaagctgtc
ttgctggcccataatgccgcctttgatctacttgccattagccacaaaggggtcgccttt
gatatccctgtgatcgacaccctgctgatttcacgggcacttgacgaagcactcgacggg
catgatttggatagccttgcccagcgctacgatctggcttttccaccagggacacgccac
actgcattaggcgatgcccgcgtcaccgccgagctatggctagccctactgccacgctta
gaagcccgcggcgtcgatacgcttgagcagttgttagcgctgcaagccaacgccttcgac
cgacaggatgccagcgcctga
DBGET
integrated database retrieval system
