Halomonas profundus: LMS44_11220
Help
Entry
LMS44_11220 CDS
T08361
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
hpro
Halomonas profundus
Pathway
hpro00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hpro00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LMS44_11220 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hpro01007
]
LMS44_11220 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpro03016
]
LMS44_11220 (aspS)
03029 Mitochondrial biogenesis [BR:
hpro03029
]
LMS44_11220 (aspS)
Enzymes [BR:
hpro01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
LMS44_11220 (aspS)
Amino acid related enzymes [BR:
hpro01007
]
Aminoacyl-tRNA synthetase
Class II (A)
LMS44_11220 (aspS)
Transfer RNA biogenesis [BR:
hpro03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
LMS44_11220 (aspS)
Prokaryotic type
Other AARSs
LMS44_11220 (aspS)
Mitochondrial biogenesis [BR:
hpro03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
LMS44_11220 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
UEQ06407
LinkDB
All DBs
Position
2500568..2502349
Genome browser
AA seq
593 aa
AA seq
DB search
MRSHYCGQLNETLVDQTVTVCGWVHRRRDHGGVIFLDMRDRDGIAQFVVDPDTAEAFANA
DRARSEFVLRITGRVRLRPEGTQNANMPTGMIEVLAKDVEVLNTAVTPPFQLDEHGKVGE
EVRLKHRYIDLRRPDMIEKLRLRSRISHNVRAYLENQGFLDIETPVLTRATPEGARDYLV
PSRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQIDIEASF
VEENDIMGITEAMIRQLFQDVLKAELPEFPRMTWQEAMDRFGSDKPDLRIPLELTDVDDL
MQQVDFKVFSGPASADDGRVAALKVPGGAKLSRKEIDEYTKFVGIYGAKGLAWIKVNERA
KGLEGLQSPIVKFMENIVEELLDRVGAEDGDIIFFGADKARIVNEAIGALRVKLGADLEL
YTQEWAPLWVVDFPMFEADDSGRLSPLHHPFTAPSCTPEELKADPANALSRAYDMVLNGT
ELGGGSIRIHDQTMQSTVFEILGIGEEEAQEKFGFLLDALQYGAPPHGGLAFGLDRLVML
MVGAKTIREVIAFPKTQSAACLMTNAPGEVSPEQLKDLNIRLRQKVKAEPAAE
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagccattattgcggccagctaaacgaaactttggtggatcaaacggttacggta
tgcggatgggttcatcgccgccgtgaccacggtggggtaattttcctcgatatgcgcgat
cgcgacggcatcgcacagttcgtggtcgaccctgataccgccgaggcattcgctaatgcc
gaccgtgcccgcagtgaatttgtcctgcgtatcactggtcgcgttcggctgcgcccagaa
ggcacccaaaacgccaacatgccgacgggtatgattgaagtgttggcaaaagacgttgaa
gtgctcaataccgccgttaccccgccattccagctggatgagcatggcaaggtcggcgaa
gaagtgcgcttaaagcatcgctatatcgatctgcgtcgcccggatatgatcgagaagctg
cgtctgcgctcgcgtatttctcataacgtgcgcgcgtacctcgaaaaccaaggcttcctg
gatatcgaaacgccggtactcacccgcgctacgccagagggtgctcgtgattacctggtg
cctagccgtacccacgcgggtagtttctttgcactgcctcagtcgccgcaactgtttaag
cagctgttgatggtggcgggctttgaccgctactaccaaattgccaagtgcttccgcgat
gaagacctgcgcgccgaccgtcagcctgagttcacccagattgatatcgaggcgtcgttt
gtggaagagaacgacatcatgggcattaccgaagccatgattcgtcagcttttccaggac
gtgctaaaagccgaactccctgagttcccgcgcatgacctggcaggaagcgatggatcgc
ttcggttccgataagccggatctgcgtatcccgctggaactgaccgatgtcgacgacctg
atgcagcaagtcgatttcaaagtcttctctggccccgccagcgcggatgatggccgcgta
gcggcgctgaaagtacccggcggcgccaagctatcgcgcaaagagatcgacgaatatacc
aagtttgtcggcatctacggcgccaaaggcttggcgtggatcaaggtcaacgagcgcgcc
aaagggcttgaaggtctgcagtctccgatcgtcaagtttatggaaaacatcgttgaagag
ctgctcgaccgcgtgggcgcagaagatggtgacatcatcttcttcggtgccgataaagcc
cgtatcgttaacgaagccattggcgcgctgcgcgtcaagctcggtgctgatctggaactc
tatactcaagagtgggcgccactgtgggtagtcgacttcccaatgtttgaagccgacgac
agtggtcgcctgagcccgctgcaccacccctttaccgcgccttcctgcacaccggaagag
ctcaaggcagaccccgccaatgcgctttcacgcgcttacgatatggtgctcaacggtacc
gaattgggcggcggctctattcgtatccacgatcagaccatgcagagcacggtgtttgag
attctaggcatcggtgaagaagaagcccaagagaaatttggcttcctgctggatgcactt
cagtatggtgcaccgcctcatggtggcttagcctttggcttggatcgcttggtcatgctg
atggtcggtgccaaaactattcgtgaagtcatcgccttcccgaaaacccaaagcgctgcc
tgtttgatgaccaatgcaccgggcgaagtcagccccgagcagttgaaagatttgaacatc
cgcctacgtcagaaagtcaaagcggaacccgccgccgaataa
DBGET
integrated database retrieval system
