Halomonas profundus: LMS44_11820
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Entry
LMS44_11820 CDS
T08361
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hpro
Halomonas profundus
Pathway
hpro03030
DNA replication
hpro03430
Mismatch repair
hpro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LMS44_11820 (dnaQ)
03430 Mismatch repair
LMS44_11820 (dnaQ)
03440 Homologous recombination
LMS44_11820 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpro03032
]
LMS44_11820 (dnaQ)
03400 DNA repair and recombination proteins [BR:
hpro03400
]
LMS44_11820 (dnaQ)
Enzymes [BR:
hpro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LMS44_11820 (dnaQ)
DNA replication proteins [BR:
hpro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LMS44_11820 (dnaQ)
DNA repair and recombination proteins [BR:
hpro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LMS44_11820 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
vATP-synt_AC39
Glucosamine_iso
Motif
Other DBs
NCBI-ProteinID:
UEQ06586
LinkDB
All DBs
Position
complement(2614569..2615309)
Genome browser
AA seq
246 aa
AA seq
DB search
MRQVILDTETTGIDPKDGHRLVEIGAIEMVNRRFTGRTYHQYINPERHIDAEVVAVHGID
DARVANEPVFAAIADEFWAFIEGAELVIHNAPFDVGFIDHELGMLNRQRKSPVLGPVSDH
CGVLDTLTMARKMHPGQRNSLDALCKRYDIDNGHRVLHGALLDSEILAEVYLAMTGGQTA
LTLDAASAAEQEQADTSNEGMSIQRLSLTPGQLRVVRPTDEERAAHQAKCEAHQLNWFEE
GAASDA
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcaggtgatcttggatactgaaaccacgggtattgaccccaaagatggccatcgc
ctagtcgaaattggtgctattgagatggtcaatcgacgcttcactggtcgcacttatcac
caatacatcaatcctgagcggcatatcgatgctgaagtagtcgccgttcacgggattgat
gatgccagagtcgctaacgagccggtattcgcggcaattgccgatgagttttgggcattt
atcgaaggcgcggagctggtgattcataacgcccccttcgatgtgggctttattgaccac
gagctgggcatgttgaatcggcagcgtaaatcccctgtgttggggccggtaagcgatcat
tgcggcgtattagatacgctgaccatggcgcggaagatgcaccccggtcagcgcaacagt
cttgatgcattgtgcaaacgctacgatatcgacaatggccaccgggtactgcacggcgca
ctgttagactctgaaatcctcgccgaagtctacctggcgatgaccggtgggcagaccgcg
ctgaccttggacgcggcctccgcagcagaacaggaacaggcggatacctccaatgagggg
atgtcgattcagcggctttctttaacgccgggccagttgcgcgtggtgcggccaacagac
gaagagcgagcggcccatcaggccaagtgcgaggcgcatcaattgaactggtttgaggag
ggtgcggccagcgatgcttag
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integrated database retrieval system
