Halomonas profundus: LMS44_11840
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Entry
LMS44_11840 CDS
T08361
Name
(GenBank) transglycosylase SLT domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
hpro
Halomonas profundus
Brite
KEGG Orthology (KO) [BR:
hpro00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hpro01011
]
LMS44_11840
Enzymes [BR:
hpro01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
LMS44_11840
Peptidoglycan biosynthesis and degradation proteins [BR:
hpro01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
LMS44_11840
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
SLT_2
LysM3_LYK4_5
LysM_RLK
Motif
Other DBs
NCBI-ProteinID:
UEQ06518
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Position
2617575..2618798
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AA seq
407 aa
AA seq
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MTYRTIRQRLMLSAGSTVIMGLMLAAAASSQASATAYEGSTASTSKSVDATKPRPTPFRI
HFWEALELEPQDAWTTLRKSFQWQEKSLPDEAQARVDEWIEHYRSSPENIATITERASPW
LAWITQQVSERGLPGEVALIPFVESSFDPGARSHRGAAGLWQFMPGTGDALGLVRNGNYD
GRLDVLTSTEAALDYLEMQADQWYEGDLMLSLAAYNAGAGTVNRARRQAQSQGLNGDYWD
LSLPYETMQYVPKLKAIATIINDPEQYGVSLPEIHVDPAFAKVKLAQAVTLSEASQLLGV
SQTALAELNPGLLNGSIDPRSAQTLLVPEEVDTQMLAQLSQGGSQTQDSNQALAQNSRGN
THRVERGDSLSAIAARYNIDQQDLIRWNAIDRPSTLQPGQLLTLSGR
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgacctatcgaacgattcgccagcgcttgatgctgagcgctggcagtaccgtaataatg
ggcctaatgttagccgctgcggcaagctcacaagcctctgcgacagcctatgaaggatct
acggcatcaaccagtaaatcagtagacgctacaaaaccacgccccacgccgttccgaatc
catttttgggaggcgctggagctggaacctcaggacgcttggacaacgctgcgtaaaagc
tttcagtggcaagagaagtcactgccagacgaggcccaagcacgggtagacgaatggatt
gagcactaccgttccagccccgaaaacattgctactatcaccgaacgcgcctctccctgg
cttgcctggattacccagcaagttagcgagcgtggcctgcctggtgaagtcgcgttaata
cccttcgtcgagagctcctttgacccaggcgcgcgaagtcatcgcggcgctgctgggcta
tggcaatttatgcccggcactggtgatgcattgggtttggtacgcaacggaaactacgat
ggccggttagacgttttaacctccaccgaagcggcgctggactacttggaaatgcaggcc
gatcagtggtatgaaggcgatctgatgctttcattagcggcttataacgccggcgcaggc
accgttaaccgcgctcgacgccaggcccaaagccaaggcctaaacggtgattactgggat
ctctcgctgccctatgaaaccatgcagtatgtgcccaaactgaaagccatcgcgaccatc
attaacgaccctgagcagtacggtgtcagcttgccggaaatacatgttgatccggccttc
gctaaagttaagttggcccaagcagtgacgctctcagaagcctctcaactgctgggtgtc
agccaaaccgcgttagccgaattaaaccctggcttgctcaatggcagcattgacccccgt
agtgctcagacactgctggtacctgaagaagtggatacccagatgctagcgcagctttct
caaggcggcagtcaaacacaagacagcaaccaagcgcttgcgcaaaacagccgtggcaat
acccaccgcgttgaaagaggtgacagtctctctgcgattgcggcccggtataatattgac
cagcaagaccttatacgctggaatgcgattgaccgccccagcactctgcaaccaggccaa
ctgctgacactttcagggcgttaa
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