Halomonas profundus: LMS44_12455
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Entry
LMS44_12455 CDS
T08361
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hpro
Halomonas profundus
Pathway
hpro03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hpro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LMS44_12455 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpro03400
]
LMS44_12455 (ung)
Enzymes [BR:
hpro01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LMS44_12455 (ung)
DNA repair and recombination proteins [BR:
hpro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LMS44_12455 (ung)
Prokaryotic type
LMS44_12455 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF294
Motif
Other DBs
NCBI-ProteinID:
UEQ02115
LinkDB
All DBs
Position
complement(2759699..2760382)
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AA seq
227 aa
AA seq
DB search
MANPLPDDWSQWLGNEFQADYMLALKDFLAQQKAAKKIIYPHSTQWFRAFELTPLNEVKV
VILGQDPYHGPNQAHGLCFSVQPGVPVPPSLVNIYKELATDVGFTPVRHGHLEAWAKQGV
LLLNTSLTVEQGNAASHRGKGWEPFTDRAIETVSQHAPPCVFLLWGSHARQKKALIDQRR
HLILEAPHPSPLSAHRGFFGTRHFSQANQFLQAQGRAPIEWQLPETP
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggccaatccacttcccgacgattggagtcagtggctgggtaatgagtttcaggctgac
tatatgctggcgctaaaagattttttggcgcagcaaaaagctgcgaagaagatcatatat
ccccactcaacgcagtggtttcgtgcctttgaactgaccccgttgaacgaagtgaaggtg
gttattttaggccaggatccctatcacgggcccaatcaggctcacggtttatgcttttcc
gtgcagcccggcgtacccgtgccaccgtcgctggtcaatatctacaaggagttggccact
gatgttggttttacccccgtgcgccacggccatctggaagcatgggccaagcagggcgtg
ttgttgttaaacacttcgctgactgtggagcagggcaatgcggcatctcatcgcggtaag
ggatgggagcccttcactgaccgcgcgattgaaaccgtcagccagcacgcgccgccgtgt
gtgtttctgctgtggggtagtcatgcgcgccagaagaaggcgttaatcgaccaaaggcgc
catttaatactggaagccccgcacccatcaccgctctctgcgcatcggggcttttttggt
acccggcatttttcccaagccaatcaatttcttcaggcgcaagggcgagcacctatcgaa
tggcaattgcctgaaaccccttaa
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