Halomonas profundus: LMS44_12830
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Entry
LMS44_12830 CDS
T08361
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
hpro
Halomonas profundus
Pathway
hpro03030
DNA replication
hpro03430
Mismatch repair
hpro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LMS44_12830 (holA)
03430 Mismatch repair
LMS44_12830 (holA)
03440 Homologous recombination
LMS44_12830 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpro03032
]
LMS44_12830 (holA)
03400 DNA repair and recombination proteins [BR:
hpro03400
]
LMS44_12830 (holA)
Enzymes [BR:
hpro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LMS44_12830 (holA)
DNA replication proteins [BR:
hpro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LMS44_12830 (holA)
DNA repair and recombination proteins [BR:
hpro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LMS44_12830 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
UEQ02184
LinkDB
All DBs
Position
2829945..2831012
Genome browser
AA seq
355 aa
AA seq
DB search
MKVFADQLPAALAKKLPRVVIVAGDEPLQHRDACDAVRAAARQGGVEEREVLDVEPNFAW
GRLMEMSSNLSLFATSKLLELRLGNHKLGQEGSKALAQYAETLDNSDDVLLIGMGKLDAK
QQKSAWFKALDKHGLFVPVWPVDASRLGYWLRDRASLHGLQIDLEAARLLGERTEGNLLA
ADQELQKLALIHPQGTRLNVESIAQGVEDSTRFDVFNLADACLKGEPSRASRIVNGLRSE
GVEAPIVLWALSRELRTLLSLHQHLDQGQSFEHACKTQKPMIFDKRRPAYQKAIGRLPMK
RLHKLLLMAQRLDLAVKGAATVPLWPGLHDLAMTMAGGRGLLSESAWTYRISANN
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggtatttgctgatcagctacccgctgcgttagcaaaaaagctaccccgcgtagtg
atcgtagcgggggatgagcccttacagcatcgcgacgcctgcgatgctgtaagggccgca
gctcgccagggtggtgtcgaggagcgtgaagtactcgatgtcgagcccaattttgcctgg
ggtcgcttgatggaaatgtcgagcaacctctcgctgtttgcgaccagcaagctactggag
ttgcgcttaggcaatcacaagttagggcaagaaggcagcaaagcgttagcgcagtacgcc
gaaactctggataacagcgatgacgttctgctcattggtatgggcaagcttgatgccaag
cagcaaaaaagcgcttggttcaaagcgctggataagcacggcttgtttgttcccgtgtgg
cccgtggacgcttcccgcttgggctactggctacgggatcgtgcttcattgcacggtcta
caaattgatctggaagccgctcgcctgctgggagagcgcaccgaaggcaatcttttggcc
gctgaccaagagttgcaaaagctggcactgattcacccccaaggcacccgcttgaacgtg
gaaagtattgcccagggagtagaagacagcacccgctttgatgtcttcaatttggccgat
gcctgcctgaaaggcgaacccagccgcgcttcgcgcattgtgaatggcttacgcagtgaa
ggcgttgaggcgcctatcgtgctgtgggcacttagccgagagctacgcacgctactctcg
ctgcatcagcacctggatcaagggcagagttttgagcacgcctgcaaaacccaaaagccg
atgatttttgataagcgccgccccgcttaccagaaagccattggccgcctgcccatgaaa
cgactacataaattgctattaatggcccagcggctcgatttagccgtcaagggcgcggca
actgtaccgctatggcccggcctacacgatctggccatgaccatggccgggggccgtgga
ctgctctcagaatccgcctggacctatcgcattagtgcaaataattag
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