Halomonas profundus: LMS44_14045
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Entry
LMS44_14045 CDS
T08361
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
hpro
Halomonas profundus
Pathway
hpro00071
Fatty acid degradation
hpro00280
Valine, leucine and isoleucine degradation
hpro00310
Lysine degradation
hpro00362
Benzoate degradation
hpro00380
Tryptophan metabolism
hpro00410
beta-Alanine metabolism
hpro00640
Propanoate metabolism
hpro00650
Butanoate metabolism
hpro00907
Pinene, camphor and geraniol degradation
hpro00930
Caprolactam degradation
hpro01100
Metabolic pathways
hpro01110
Biosynthesis of secondary metabolites
hpro01120
Microbial metabolism in diverse environments
hpro01200
Carbon metabolism
hpro01212
Fatty acid metabolism
Module
hpro_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
hpro00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
LMS44_14045 (fadB)
00650 Butanoate metabolism
LMS44_14045 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
LMS44_14045 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LMS44_14045 (fadB)
00310 Lysine degradation
LMS44_14045 (fadB)
00380 Tryptophan metabolism
LMS44_14045 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
LMS44_14045 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
LMS44_14045 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
LMS44_14045 (fadB)
00930 Caprolactam degradation
LMS44_14045 (fadB)
Enzymes [BR:
hpro01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
LMS44_14045 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
LMS44_14045 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
LMS44_14045 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
LMS44_14045 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
UEQ02415
LinkDB
All DBs
Position
complement(3081485..3083671)
Genome browser
AA seq
728 aa
AA seq
DB search
MIYQGNAITVTRRDTPSGNDIAMLTFDLKDESVNKLSSAVVAELSEAVKAIQAENSLKGL
LIASGKDVFIVGADITEFHSLFDKGEAYLEEMNLKVHDIFNAIEDLPFPTVTAINGLALG
GGCEVLLTTDFRVMGEKAKIGLPETKLGILPGWGGCVRLPRIIGADNAIEWIAGGTENRA
DAALKVGAVDAVVTDEQLEEAALDILDRANAGELDYQARRAEKTSPLKLNPIEQMMAFET
AKGYVAGKAGPHYPAPVEAIKVIQKGAGEERGRAQAIEAKAFAKLALSSVAFNLVGLFLN
DQVVKKKASKYEKQAQPVKQTAVLGAGIMGGGIAYQSASKGTPILMKDIKDDAIELGLKE
ARKLFAKQVERKKLTTEQMAEKLTNIRPTLSYGDFGNVDLVVEAVVENPKVKDAVLTEVE
GMVSENTILTSNTSTISINRLAQNLKRPENFCGMHFFNPVHRMPLVEVIRGEKTSDAAVA
ATVAYARAMGKTPIVVNDCPGFLVNRVLFPYFGGFSFLVEQGADFQHVDKVMEKFGWPMG
PAYLLDVVGLDTAVHANEVMAEGFPDRMARDGKTAIQVMYDNDRLGQKNDKGFYAYEEDK
KGKPKKVTDEAAYALVKEVVKEHKEFSDEDIIARMMVPLCLETVRCLEDGIVATPAEADM
ALIYGIGFPPFRGGALRYIDAMGVAEFVKLAEGLAEELGPLYAPTDKLRQMAQNNEQFYS
SDNSATQA
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgatctatcaaggcaacgccatcacggtgacacgtcgtgacaccccgagtggcaatgat
atcgcaatgctcactttcgatctgaaagatgagtccgtcaacaagctttccagcgcggtg
gtcgcagagctgagcgaagcagtaaaagccattcaagctgaaaatagcttaaaaggttta
cttattgcgagcgggaaagatgtgtttatcgtgggcgccgatatcaccgagtttcacagt
ctatttgataaaggcgaagcctaccttgaggagatgaatctcaaggttcacgatattttt
aacgctattgaagatctgccgttccctaccgtaacagcgatcaatggtctggcgctgggt
ggcggctgcgaagtattgctgaccactgattttcgcgtgatgggcgagaaagccaagatc
ggcctgccagaaaccaagctcggcattctgcccggttggggcggctgtgtacgcctgccg
cgcattattggcgccgataatgccatcgagtggattgccggtggtaccgaaaaccgtgcc
gatgccgcgctaaaagtgggcgccgtcgacgcggtggtgacggacgaacagctggaagag
gccgcgctggatattcttgaccgtgccaatgccggtgagctggattaccaggcccgtcgt
gctgaaaagaccagcccgctgaagctcaacccgattgagcagatgatggcgtttgaaacg
gcgaaaggctatgtcgccggtaaagcggggcctcattatccggcgccggtagaagcgatc
aaagtgattcagaaaggcgctggcgaagagcgtggccgtgcccaggcgattgaagccaaa
gccttcgccaagctggcactcagcagcgtggcgttcaacttggtgggtctgttcttgaac
gaccaagtggtcaagaaaaaagccagcaagtatgagaagcaggcgcagccggtgaagcaa
acggccgtgctgggtgcgggtatcatgggtggtggtatcgcttatcagagtgcctctaaa
ggcacgccgattctgatgaaagatatcaaggatgacgccattgaactgggcctgaaagaa
gcccgtaagctatttgccaaacaggtggagcgcaaaaagctgaccaccgagcagatggcg
gagaagctgactaatattcgcccgacgctctcctacggagattttggcaacgtcgatctc
gtcgtcgaagcggtggttgaaaatcccaaagtcaaagacgccgtgcttaccgaagtggaa
ggtatggtgagcgaaaataccattctcacctcgaacacatcgacgatttccatcaaccgc
ttggcgcaaaacctaaagcggcctgaaaacttctgcggcatgcacttcttcaaccccgtg
caccgcatgccgctggtagaagtcatccgtggtgagaagacctcggatgccgccgttgct
gccaccgtggcctacgccagggcaatgggcaaaacgccgattgtggttaacgactgccca
ggcttcttggtcaaccgggtgcttttcccctactttggcggctttagcttcctggttgag
cagggtgctgacttccagcacgttgataaggtgatggagaagttcggctggcccatgggt
ccggcctacctgctggacgtggtcggcctggataccgccgttcacgccaatgaagtaatg
gcggaaggcttccctgatcgtatggctcgcgacggtaaaaccgccattcaggtcatgtac
gacaacgaccgtttaggccagaagaacgacaagggtttttacgcctacgaagaggacaag
aagggtaagccgaagaaagtcaccgacgaagcggcttacgctttagttaaagaggtggtg
aaagagcataaagagttttccgacgaggatattatcgctcgcatgatggtaccactctgc
ttggaaaccgtgcgctgcctggaagatggcattgtggccacgccagccgaagccgatatg
gcgttgatctatggcatcggcttcccgcctttccgtggtggtgcgctgcgctacatcgac
gccatgggcgttgcagagttcgtcaagctggcggaagggctagctgaggagttgggcccg
ctatacgcgcccaccgacaagctgcgtcagatggctcagaacaatgagcaattctattcc
agtgacaactctgccacccaggcctaa
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