Halomonas profundus: LMS44_14405
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Entry
LMS44_14405 CDS
T08361
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
hpro
Halomonas profundus
Brite
KEGG Orthology (KO) [BR:
hpro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpro03032
]
LMS44_14405
03036 Chromosome and associated proteins [BR:
hpro03036
]
LMS44_14405
03400 DNA repair and recombination proteins [BR:
hpro03400
]
LMS44_14405
DNA replication proteins [BR:
hpro03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LMS44_14405
Chromosome and associated proteins [BR:
hpro03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
LMS44_14405
DNA repair and recombination proteins [BR:
hpro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
LMS44_14405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
UEQ02476
LinkDB
All DBs
Position
3160716..3161012
Genome browser
AA seq
98 aa
AA seq
DB search
MTKSELIEQIAMRQPELSAKDVETAVRIILDDMTDSLASGGRVEIRGFGSFSLHYREPRV
GRNPKTGDAVDLEGKYVPHFKPGKELREQVDASRALGY
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgactaaatctgaattaatcgaacaaattgcgatgcgtcagccggagttatccgccaaa
gatgttgaaacggcggtgcgtattatcctggacgacatgacggattctctagctagcggc
ggtcgcgttgaaattcgtggtttcggcagtttttcactgcactatcgggagccgcgggta
gggcgcaatccaaaaacaggcgatgcagtcgatctggaaggtaagtatgtgccgcacttc
aagcctggcaaggagctacgcgagcaggtagacgctagtcgagcactaggctactaa
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integrated database retrieval system
