Halomonas profundus: LMS44_14820
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Entry
LMS44_14820 CDS
T08361
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
hpro
Halomonas profundus
Pathway
hpro02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hpro00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LMS44_14820
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hpro02000
]
LMS44_14820
02044 Secretion system [BR:
hpro02044
]
LMS44_14820
Transporters [BR:
hpro02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
LMS44_14820
Secretion system [BR:
hpro02044
]
Type I secretion system
Adhesin protein transporter
LMS44_14820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
Peptidase_C39
SMC_N
ABC_ATPase
AAA_21
Motif
Other DBs
NCBI-ProteinID:
UEQ02558
LinkDB
All DBs
Position
complement(3267251..3269428)
Genome browser
AA seq
725 aa
AA seq
DB search
MTQTKLERPIAANASEQPVGDELLECLKAVASFHQHEVSSEALRAGLPLEQGKLTPSVFG
RAASRAGLTARIVKSKLSALNPALFPAILLLEPGRACVLLGIDLKQQKANVIFPELSESN
VELPLEELYAGYSGEAIYVRPKFLADNASEPGVKKRRDQHWFWGVIRENRSLYRDIVLGS
VAINVFAIAMPLFVLNVYDRVVPNQATETLWVLAIGIFIVLCFDLVLRLMRSSFVDLAAS
RADVKLSSSIMAKALGLRLEERPASTGSFTSTLQSFESVRAFIGSATILGIVDLPFVLMF
AAIIALINPWLVLPVLVGIVFVLLYALAAQGKLHELSQTTWEVGAQRNSLLVESISQLEN
VKALRAESRIQRHWEKSSAFLSRTGAQLKMVSTSVSSVAQWAQHSVAVCVIIVGVYQIIE
GNLTQGGLIAAYMLSSRAMAPISQAAALLAQYHQSSTALESLNAVMDKKVERHEGKAYVE
KPSFAGNIRLEKVTLRYPNEEREALKDVSITVKAGEKVALLGRIGCGKSSLNKLVLGFYQ
PTSGAVLVDNVDIRQLDPLQLRRHIGYVPQDVSLFSGSLRDNIVAGGGSDRVEDEALLRA
IDLAGLESLVNNHPHGVDLQVGERGQALSGGQKQSVAIARALVQDPPILLLDEPTSSMDN
ASEEAFKANLKNVAAGKTILVVTHRTSLLSLVDRIIVMDAGKVVADGPRDTVVEALRKGQ
IGRAS
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
gtgacacaaaccaagctggaaaggccgatcgctgcaaatgctagcgagcagccagtaggc
gatgagttactcgaatgtttgaaagcggttgcctcatttcatcagcatgaggtgtcatca
gaggcccttagagctggcttgcccttggagcagggcaagctaacgccttccgtatttggt
agggctgcctcccgtgctggactgacggcgcgaattgtaaaaagtaagctgtcggcgctt
aaccccgctctctttcccgctattctattgctggaaccaggtagggcgtgcgtactgttg
gggatagatctcaaacagcaaaaagcgaacgtcatttttcctgaactatctgaatcaaac
gttgaactgcccctggaagagctgtatgcaggctatagcggcgaagctatttacgttcgc
cctaagtttttagcggataacgcctcggaaccaggcgtcaagaaacgccgcgatcagcac
tggttttggggcgtcattcgcgaaaatagatctctctaccgcgatatcgtgttggggtcg
gtggcgatcaatgtgtttgccatcgccatgccgctgttcgtgcttaacgtctatgaccga
gtagtgcccaatcaggcaacggaaacgctatgggtgctggcaataggcatctttatagtg
ctgtgctttgatttggtactcaggctaatgcgcagcagctttgtcgacttagccgctagc
cgtgcggatgtgaagctctcttcctcaatcatggctaaagcattgggccttcgtttagaa
gagcgccccgcatcaaccggctcgttcacttcgacgctccagtcttttgagtcagtacgc
gcgtttattggttctgcgaccattctggggattgtcgatcttccgttcgtactgatgttt
gcggcgattatcgcgctgattaatccctggctagtgctgccggtattggtgggcatcgta
tttgtgctgctctacgcgctggctgctcagggtaagcttcatgaactttctcaaactacc
tgggaagtcggcgcacagcgcaactcactgttggtagagtctatttcccaattagaaaat
gttaaggccctgcgggctgaaagccgtatccagcgccactgggaaaaatcatctgccttc
ctttcccgtactggcgcgcagcttaagatggtgagcacctcagtctccagcgtggcccag
tgggcgcagcacagtgtggcggtgtgcgtcattatcgtcggtgtatatcaaatcatcgaa
ggtaacctcacccagggtgggttgattgccgcttatatgctctcttcccgggcgatggca
cctataagtcaggctgcagcgctgctggcgcaatatcatcaatcctccacggcgcttgag
tcactcaatgcggtaatggataagaaggttgagcgccatgaaggcaaggcttatgtagaa
aagcccagcttcgccggcaatatacgccttgagaaagtcactcttcgttaccccaatgaa
gagcgcgaggcgctgaaggatgtatcgataactgtcaaagccggtgagaaagttgcgtta
cttggccgcattggttgcggcaaatcttcattaaacaagctagtgctagggttttatcag
ccaacctcgggggccgtgctggttgataacgtggatattcgccagttagacccactgcag
ctgcgccgtcatattggctatgttcctcaagacgttagcctgttttcaggatctctgcgg
gacaatattgtggcgggtggcggtagcgaccgcgttgaggatgaggcattgcttagagcg
attgacttggccggcctagagtcactcgtcaacaaccacccacatggcgtggatttgcaa
gtaggtgaacgcggccaagcactttccggcgggcaaaaacagtctgtcgccattgcccgt
gcgctagtgcaggatccgcctatcctgctgttggatgaaccgacaagctctatggataat
gctagcgaagaagcgtttaaagccaaccttaaaaacgtcgctgctggcaaaaccatccta
gtggtcacgcaccgtacctcgctcctctcattggtcgaccgaattattgtcatggatgcc
ggcaaggtcgtagcggatggcccgcgggatacagtggtagaggcattgcgtaaaggccag
atcgggagggcatcgtaa
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