Halomonas profundus: LMS44_15240
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Entry
LMS44_15240 CDS
T08361
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
hpro
Halomonas profundus
Pathway
hpro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LMS44_15240 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpro03400
]
LMS44_15240 (recC)
Enzymes [BR:
hpro01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LMS44_15240 (recC)
DNA repair and recombination proteins [BR:
hpro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LMS44_15240 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
DUF6085
Motif
Other DBs
NCBI-ProteinID:
UEQ02635
LinkDB
All DBs
Position
3351273..3354902
Genome browser
AA seq
1209 aa
AA seq
DB search
MSANSLLSQTPLTPGFMVVHANRLEDLRGLAVEWMRRHPLSPLENETILVQSNGIGQWLK
LALAEDPAQGGAGIAAALNVTLPARFLWQAYRTVLTHLTHDEHAVPETSPFDKSRLIWRL
LRLLPSLAEQEAFAPLARFLEVDRDQRKHYQLAERLADLFDQYQVYRADWLDAWAKGNDV
LITARGEARPLEAHQLWQPELWRALRDDVANNLGQAGLNSSRAQVHSRFLEAAVQLEGQA
CPPGLPRRLIIFGISSLPQQTLEALAALSRCCQIVLCVHNPCQYYWADIIEHKDLLRASR
YRQRRKAGMPDALDVLGTGDADDALHLHAQPLLAAWGKQGRDYLRLLDEHDDSGNYQTLF
EQQALRIDMFEPFSGEERNCLLSQLQDDIRELRPVAETQTHWPALDPASDDSIVFHIAHG
PQREVEILHDQLLAAFSADPDLRPRDIIVMVPDIDRYAPHIEAVFGQYRSAFGSYNANAR
PDDPRYIPYTLSDQASRHRLPMMIALEKLLRLPELRLSVSDLLDLLEVPALRARFGIDEH
DLPTLSRWIEGAGIRWGLNAEQRTRLDLPEGLTQNTWAFGLRRLLLGYTVGSAEAWQGIE
PFDDIGGLEASLAGPLANLLEKLESTWETFCQPTDAASWVARLRELLETYFLTDDAQESV
MLTKLETALQQLLDSTEEAELFDPLPLSMVREHWLGQIDEHSLSQRFLAGAVNFATLMPM
RAIPFKRVCLLGMNDGEYPRSQPPLDFDLMGSDYRPGDRSRREDDRYLFLEALLSARQQL
YISWVGRSQIDNNPMPPSVLVGQLRDHLEAGWHTQNGEPLLEALTTEHPLQPFSRRYFSA
QASDSPAQARLFTYAHEWHALHAPRSESQSGERPATLKPDSEQQGTLTLNQLGSFLREPA
KAFFNTRLGVYFEQEELTQLDVEPFTLDGLQNWQLQDQLIAAQRHAVDNGQPRVEALHTA
LERFKGQGVLAVGAFGERMREALAEPMDALFGAYEEALQEWPQVVAVPQAVHVVESAEGQ
VTLEDWLGELRQDDAGNRCRLLLLSSSLISQGRGRGQYRWQHLLRPWVAHLAGNIERPMT
TQLLSKAGHVRLEPLDAENARFQLDSLLSAWCDGMQAPLPLAPQAAFAWLAKQGTPELEA
DSARESDAYAAAETAYEGGRFQTGEVAQSAYLSHQWPSFEKLFNERALGHSFATLTDALY
APLHRSVKG
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaaactcgctgctctcgcaaacgccgttaacgccgggctttatggtggtacat
gccaatcgcctggaagatttgcgcggtttggcggtggagtggatgcgccgacatccgctc
tcgccgctagagaacgagaccattctggtacagagcaacggcattgggcagtggctaaag
ctggcgctagcagaagacccggcccaaggcggtgcaggcatagcagcagcattgaacgtc
accctgcctgcgcgttttctatggcaggcctaccgcacggtgctgactcacttaacgcac
gacgagcacgcagtgcccgaaacctcgccgtttgataaatcgcggttgatatggcgctta
ttgcgcctgctgcccagccttgccgagcaggaagcttttgcgccgctggcacgcttttta
gaagtggatcgcgaccagcgcaagcactaccaactggccgagcggctggcggatctgttc
gaccagtatcaggtgtatcgcgccgactggctggacgcctgggccaagggcaacgatgtg
ctgatcaccgcccggggcgaagcccgcccgctggaagcgcaccaactatggcagccagag
ctatggcgcgcactgcgcgacgatgtggctaataacctaggccaagcgggccttaacagc
agccgtgcccaggtgcacagccgctttctggaagccgccgttcagcttgaaggccaagcg
tgcccacccggcctgccccgacgattgattattttcggcatctcatcgctgccgcaacag
acattagaagcactggcggcgctgtcgcgctgctgccagatcgtgctctgcgtgcacaac
ccctgccagtactactgggcggatatcatcgagcacaaagacctgctgcgcgccagccgc
taccgccagcgacgcaaggccggcatgcccgacgccctggacgtactcggcaccggtgat
gccgacgacgccctgcatctacacgcccaaccgctgctggccgcctggggcaagcagggc
cgcgactacctgcgcctgctcgacgaacacgacgattcaggcaactaccaaaccctattc
gagcagcaggcgctgcgcatcgacatgttcgagcccttcagcggcgaagagcgcaactgc
ctgctcagccagctacaggacgatatccgcgagctgcgcccagtagcggaaacccaaacc
cactggcccgcgctagacccagccagcgacgactccattgtgttccatatcgcccacggc
ccccagcgggaagtggagattcttcacgaccagttgctggcggccttcagcgccgacccg
gatctgcgcccgcgagatatcatcgtcatggtgccggatattgaccgctacgcgccgcat
attgaagccgtgttcggccagtaccgctccgctttcggtagctataacgcgaacgctaga
cccgacgacccgcgctacattccgtataccctttcggatcaggccagccgccaccgcctg
ccgatgatgattgcgctggaaaaactgctgcgcttaccggagctgcgcctctcggtaagc
gatctgctcgatttgctggaagtgcccgcgctgcgcgcacgctttggcatcgatgaacac
gacctgccgaccctgagccgctggatcgagggtgcaggtatccgctgggggctcaatgcc
gaacagcgcacccggctggatctacccgaagggctaacccaaaacacctgggcctttggc
ctgcgccggttgctactggggtatacggtgggaagtgcagaggcgtggcaaggtatcgag
ccattcgacgatattggcgggctggaagcttccctggcaggcccgctggcaaatctgctg
gaaaaactggaaagcacctgggaaaccttctgccagcccaccgacgccgccagctgggtg
gcccggctgcgagaactgctggaaacctactttttgaccgacgacgcccaggaaagcgtc
atgctcaccaagttggagaccgcgctacagcagctgttggacagcaccgaagaggccgaa
ctttttgacccgctgccgctctccatggtgcgtgaacactggctggggcaaatcgacgag
catagtctttcccagcgtttcctggcgggcgcggtcaacttcgccaccctcatgccgatg
cgcgccattccgtttaagcgggtgtgtttattgggcatgaacgacggcgagtacccccgt
tcccagccgccgctggactttgacttgatgggcagcgactaccgccccggcgaccgctcg
cggcgggaagacgaccgctacctgtttctggaagcgctgctctctgcccgccaacagctc
tatattagctgggtaggccgcagccagatcgacaacaaccccatgccgccctcggtgttg
gtcggccagttgcgcgaccacctggaagcgggctggcacacgcaaaacggcgagccgctg
ctggaagcgttaaccaccgagcacccgctgcaaccgttcagccgccgctatttctctgcc
caggccagcgactcccccgctcaagcacgactgttcacatacgctcacgagtggcacgcc
ctgcacgcaccgcgaagcgaaagccaatcaggcgagagaccagcgacgcttaaaccagac
agcgaacaacaaggcacgttaaccctgaaccagctaggcagctttctacgcgaacccgct
aaggcgtttttcaacacccgtctgggggtctacttcgagcaagaagagcttacccaactg
gatgtagagcccttcactttggacgggctacagaactggcaactacaggatcagttaatc
gccgcccagcgccacgccgtggataacggccagccgcgagtggaagcactgcacacagca
ctggaacgcttcaagggccagggtgtgctagctgtgggtgcctttggcgagaggatgcgc
gaagcgctggcagaaccaatggacgccctgtttggcgcctacgaagaagcgttgcaagag
tggccccaagtagtggcggtgccccaggcggtgcatgttgttgaaagcgctgaggggcag
gtaacgctggaagattggctgggagaacttcgccaggatgacgcaggcaatcgctgccgt
ctgctactgctcagcagtagtttaatcagccaggggcgtggccgcggtcaatatcgctgg
cagcacctgctacgcccttgggtcgcccacttggcgggcaatattgagcgcccgatgact
acccagctactttccaaagcaggccatgtacgcctggagcctttagatgccgagaatgcc
cgcttccagctagattccctactcagcgcctggtgcgatggcatgcaggccccgctaccg
ctagctccgcaagccgctttcgcctggctggccaaacaaggcacgccggaattggaagcc
gatagcgcaagggagagcgacgcctacgccgccgccgaaaccgcctacgaaggcggccgc
tttcaaaccggcgaagttgcccaaagcgcctacctctcccaccaatggccgagctttgaa
aagctattcaacgagcgtgcccttggccacagcttcgccacgctgaccgatgcgctctat
gcgccactgcatcgctcggtcaagggatga
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integrated database retrieval system
