KEGG   Halomonas profundus: LMS44_16360
Entry
LMS44_16360       CDS       T08361                                 
Name
(GenBank) SMC family ATPase
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
hpro  Halomonas profundus
Brite
KEGG Orthology (KO) [BR:hpro00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hpro03400]
    LMS44_16360
DNA repair and recombination proteins [BR:hpro03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     LMS44_16360
    Archaeal homologous recombinant proteins
     LMS44_16360
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B SMC_N AAA_29 ABC_tran
Other DBs
NCBI-ProteinID: UEQ02847
LinkDB
Position
complement(3581692..3584757)
AA seq 1021 aa
MTPLILTMQAFGPFAGSETIDFTALGRSPLFLINGPTGAGKSSILDAICFALYGQTTGNE
RDPAQMRCDQADASLLTEVTLDFRLRGVDYRVRRVPQQERPKARGEGTTTHNAEAQLWRL
KADGDVETCLVARKVNDATAELQTLIGLDANQFRQVMVLPQGKFRELLLAGSKEREVIFS
QLFQTQIFQRIEERLRTQANQIERAVSDHRQHISGILAGGELESEDALAQELEELTPQVD
QARQRFETAQQQRRSAEKQRDEALALQRQFEARDRLAADKARHLEQHTQIESTKERLAQS
THAQALRPQRAALDQAQQTLITAQADQRQAQAALATQRSNAEQAQQALEVARQRQAELPA
LRERHRQLGEFIHKSQQLSELQARFKTAQDSWQQADSALKRDEAQLDNIRQQGEAISVNL
ERLQTEFQQLASAPAELSRHNDLLTQRQELDELTRQAHELTRQQQQATEALNRQQSEAER
AQRHATEQEMRWHQGQAALLALTLEQDVPCPVCGSLEHPAPAVNSADVVSQAQVEEARAA
QEQARQAQQSAERHHHQLTQQINYNTEQAQRLTQQLGEWASQPLAELQTACEGLRRQVQR
RESVEREISQQTVAREALRREWGALDKQLKTQRPAVEKAKEDALRLESQRDQLSQSLPED
ARDPEAMRRTLTELEHQIAQLEKAWESAQQMLSTSQTQLARAEEQLRGANERIERSEQTL
QQVQAEWQAALQASPFEDEAAFQAAQLDDTQRQELTRQVEAYQRRLAELEGALENYQTQL
AEKTPPNMAALTSLTEAAQVEENTQLEAWRGLDGRLTTLRGIRQKLATAHRAQAELEAQY
QLWGTLSEVANGRTGHRISLQRFVLGVLLDDVLIQASERLVRMSRGRYQLVRREDPSKGN
RASGLELDVADTYTGKNRSVATLSGGESFMAALSLALGLSDVVQAYAGGIQLDTLFIDEG
FGSLDQDALDQAIAMLSELQMGGRMIGVISHVSELKEQMPVRIDVSASRHGSTVEVKGVL
L
NT seq 3066 nt   +upstreamnt  +downstreamnt
atgacaccgttaatcctcaccatgcaagcgtttgggccctttgcgggcagtgagaccatc
gacttcaccgcgctgggaagaagcccactgttcctgattaatggccctaccggcgccggt
aaaagctcgattcttgatgccatctgttttgcgctttacggccaaaccacgggcaatgaa
cgcgatccggcgcagatgcgttgcgaccaggctgacgcttcgctgctaacggaagtgacg
ctggattttcgtctgcgcggtgtggattaccgggttcgccgcgtgccccagcaggagcgt
cccaaggcgcgaggcgaaggcacgactacccataatgctgaagcccagctgtggcgatta
aaggcagatggcgatgtagagacttgcctggtagcgcgcaaagttaacgatgccaccgcg
gagctgcaaaccctgatcggcctggatgccaaccagtttcgtcaggtgatggtgctaccc
cagggcaagtttcgtgaactgctgctggcaggctccaaagagcgcgaagtaattttttcc
cagctgtttcaaacccagatttttcagcgaatcgaagagcgtctgcgcacccaggccaac
caaatcgagcgggcagtgagtgatcatcgccagcatatcagcggcatcctcgctgggggt
gagcttgagagcgaagacgcgttagcgcaagagcttgaagagctaacaccccaggtagat
caagcgcggcaacgttttgaaaccgcgcagcagcagcgccgtagcgccgaaaagcagcgc
gatgaggcgttggcgctgcagcgtcaatttgaggcccgcgatcggctggcggcggataaa
gcccgtcatcttgagcagcacacacagatagaaagcactaaggagcgcttagcgcaaagc
acccacgcccaggcgctgcgcccacagagagctgccttagaccaagcgcagcagacgctg
atcaccgcccaggccgatcagcgacaggcgcaagccgcattagccactcaacgtagtaac
gccgaacaggcgcagcaggcgttagaagtggcacgccagcgtcaggcagagctccccgcg
ctccgggagcgccaccgccaattgggcgaatttattcataaaagccagcagttaagcgag
ttgcaggcgcgttttaaaacggcgcaggactcctggcaacaagccgatagtgcgctcaag
cgtgatgaggcgcagctagataacattcgccagcagggcgaagcgattagcgttaacctg
gaacgcttacagacagagtttcagcaactggccagtgcccccgctgagctcagccgacat
aacgacctgctgacccagcgccaagagctggatgaactcacccggcaagcgcatgagtta
accaggcaacagcagcaggcgacggaggcactcaaccgccagcaaagcgaagcagaacga
gcgcaacgccacgccactgagcaggagatgcgctggcaccaggggcaggccgcgctgtta
gcgctcacccttgaacaggatgtcccttgcccggtgtgcggcagcctggagcatccagcc
ccagcggttaacagtgccgacgtggttagccaagcgcaggttgaagaagccagggcggcg
caagagcaggctcgtcaagcacaacagagcgccgagcgtcaccaccaccagctcactcag
cagattaactacaatacagagcaggcccagcggcttacccaacagctgggcgagtgggct
agccaaccgctggctgagctgcaaactgcctgcgaaggcttgcgccgccaagtgcagcgc
cgggaaagcgttgaacgtgagattagccagcaaaccgttgctcgcgaagcgctgcgccgc
gagtggggcgcgctggataagcagcttaaaacccaacggcccgcggtggagaaggcaaaa
gaggacgcgttgcgcctagagagtcagcgcgatcaactgagccaatcgctgccggaagat
gcccgcgaccctgaggcaatgcgccgaaccctcactgagcttgaacaccagatcgcacag
ctcgaaaaagcctgggagagcgcccagcagatgctctcgaccagccaaacccaactggcg
cgggcggaagagcagctacgcggtgcgaacgagcgaatcgaacgtagcgagcagacgctt
cagcaggtgcaagctgagtggcaagccgccctgcaggccagcccctttgaagatgaagca
gcgtttcaggctgcgcagttggatgatacccagcggcaagagttgactcgccaagtagag
gcgtaccaacgccgcctggctgagcttgaaggcgcgctggagaactaccaaactcagctt
gcggaaaaaacgccgccgaatatggccgcgttgaccagcctaaccgaggcggcccaggtc
gaagagaacacccagctagaggcgtggcgggggctggatgggaggctgaccacgctgcgc
ggtattcgtcaaaagcttgcgactgcccacagggcgcaggcagagctcgaagcccagtat
cagctgtggggcacgctcagcgaggtcgctaatggtcgtacggggcaccgtattagcctg
cagcgctttgtgctgggtgtgctgctggatgacgtattgattcaagcttcggagcgtttg
gtgcgcatgagccgcgggcgttatcagttggtgcgtcgggaagatccctccaaaggtaac
agagcgtcgggtctggagcttgatgtggccgacacctacaccggcaagaaccgttcggta
gcgacactctccggcggggagtcttttatggccgcgctctcgctggcgctagggctctcg
gatgtagtgcaggcttacgctggcggtattcaactggatacgctattcattgatgagggg
tttggcagcctggatcaggatgcgctggatcaagcgattgccatgctcagcgaactgcaa
atgggcgggcgcatgattggagtgatctcccatgtcagcgaactcaaagagcaaatgcca
gttcgtatagacgtaagtgccagccgccacgggagcacggtggaagtaaagggcgtactt
ctctaa

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