Halomonas profundus: LMS44_16360
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Entry
LMS44_16360 CDS
T08361
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
hpro
Halomonas profundus
Brite
KEGG Orthology (KO) [BR:
hpro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpro03400
]
LMS44_16360
DNA repair and recombination proteins [BR:
hpro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LMS44_16360
Archaeal homologous recombinant proteins
LMS44_16360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
UEQ02847
LinkDB
All DBs
Position
complement(3581692..3584757)
Genome browser
AA seq
1021 aa
AA seq
DB search
MTPLILTMQAFGPFAGSETIDFTALGRSPLFLINGPTGAGKSSILDAICFALYGQTTGNE
RDPAQMRCDQADASLLTEVTLDFRLRGVDYRVRRVPQQERPKARGEGTTTHNAEAQLWRL
KADGDVETCLVARKVNDATAELQTLIGLDANQFRQVMVLPQGKFRELLLAGSKEREVIFS
QLFQTQIFQRIEERLRTQANQIERAVSDHRQHISGILAGGELESEDALAQELEELTPQVD
QARQRFETAQQQRRSAEKQRDEALALQRQFEARDRLAADKARHLEQHTQIESTKERLAQS
THAQALRPQRAALDQAQQTLITAQADQRQAQAALATQRSNAEQAQQALEVARQRQAELPA
LRERHRQLGEFIHKSQQLSELQARFKTAQDSWQQADSALKRDEAQLDNIRQQGEAISVNL
ERLQTEFQQLASAPAELSRHNDLLTQRQELDELTRQAHELTRQQQQATEALNRQQSEAER
AQRHATEQEMRWHQGQAALLALTLEQDVPCPVCGSLEHPAPAVNSADVVSQAQVEEARAA
QEQARQAQQSAERHHHQLTQQINYNTEQAQRLTQQLGEWASQPLAELQTACEGLRRQVQR
RESVEREISQQTVAREALRREWGALDKQLKTQRPAVEKAKEDALRLESQRDQLSQSLPED
ARDPEAMRRTLTELEHQIAQLEKAWESAQQMLSTSQTQLARAEEQLRGANERIERSEQTL
QQVQAEWQAALQASPFEDEAAFQAAQLDDTQRQELTRQVEAYQRRLAELEGALENYQTQL
AEKTPPNMAALTSLTEAAQVEENTQLEAWRGLDGRLTTLRGIRQKLATAHRAQAELEAQY
QLWGTLSEVANGRTGHRISLQRFVLGVLLDDVLIQASERLVRMSRGRYQLVRREDPSKGN
RASGLELDVADTYTGKNRSVATLSGGESFMAALSLALGLSDVVQAYAGGIQLDTLFIDEG
FGSLDQDALDQAIAMLSELQMGGRMIGVISHVSELKEQMPVRIDVSASRHGSTVEVKGVL
L
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgacaccgttaatcctcaccatgcaagcgtttgggccctttgcgggcagtgagaccatc
gacttcaccgcgctgggaagaagcccactgttcctgattaatggccctaccggcgccggt
aaaagctcgattcttgatgccatctgttttgcgctttacggccaaaccacgggcaatgaa
cgcgatccggcgcagatgcgttgcgaccaggctgacgcttcgctgctaacggaagtgacg
ctggattttcgtctgcgcggtgtggattaccgggttcgccgcgtgccccagcaggagcgt
cccaaggcgcgaggcgaaggcacgactacccataatgctgaagcccagctgtggcgatta
aaggcagatggcgatgtagagacttgcctggtagcgcgcaaagttaacgatgccaccgcg
gagctgcaaaccctgatcggcctggatgccaaccagtttcgtcaggtgatggtgctaccc
cagggcaagtttcgtgaactgctgctggcaggctccaaagagcgcgaagtaattttttcc
cagctgtttcaaacccagatttttcagcgaatcgaagagcgtctgcgcacccaggccaac
caaatcgagcgggcagtgagtgatcatcgccagcatatcagcggcatcctcgctgggggt
gagcttgagagcgaagacgcgttagcgcaagagcttgaagagctaacaccccaggtagat
caagcgcggcaacgttttgaaaccgcgcagcagcagcgccgtagcgccgaaaagcagcgc
gatgaggcgttggcgctgcagcgtcaatttgaggcccgcgatcggctggcggcggataaa
gcccgtcatcttgagcagcacacacagatagaaagcactaaggagcgcttagcgcaaagc
acccacgcccaggcgctgcgcccacagagagctgccttagaccaagcgcagcagacgctg
atcaccgcccaggccgatcagcgacaggcgcaagccgcattagccactcaacgtagtaac
gccgaacaggcgcagcaggcgttagaagtggcacgccagcgtcaggcagagctccccgcg
ctccgggagcgccaccgccaattgggcgaatttattcataaaagccagcagttaagcgag
ttgcaggcgcgttttaaaacggcgcaggactcctggcaacaagccgatagtgcgctcaag
cgtgatgaggcgcagctagataacattcgccagcagggcgaagcgattagcgttaacctg
gaacgcttacagacagagtttcagcaactggccagtgcccccgctgagctcagccgacat
aacgacctgctgacccagcgccaagagctggatgaactcacccggcaagcgcatgagtta
accaggcaacagcagcaggcgacggaggcactcaaccgccagcaaagcgaagcagaacga
gcgcaacgccacgccactgagcaggagatgcgctggcaccaggggcaggccgcgctgtta
gcgctcacccttgaacaggatgtcccttgcccggtgtgcggcagcctggagcatccagcc
ccagcggttaacagtgccgacgtggttagccaagcgcaggttgaagaagccagggcggcg
caagagcaggctcgtcaagcacaacagagcgccgagcgtcaccaccaccagctcactcag
cagattaactacaatacagagcaggcccagcggcttacccaacagctgggcgagtgggct
agccaaccgctggctgagctgcaaactgcctgcgaaggcttgcgccgccaagtgcagcgc
cgggaaagcgttgaacgtgagattagccagcaaaccgttgctcgcgaagcgctgcgccgc
gagtggggcgcgctggataagcagcttaaaacccaacggcccgcggtggagaaggcaaaa
gaggacgcgttgcgcctagagagtcagcgcgatcaactgagccaatcgctgccggaagat
gcccgcgaccctgaggcaatgcgccgaaccctcactgagcttgaacaccagatcgcacag
ctcgaaaaagcctgggagagcgcccagcagatgctctcgaccagccaaacccaactggcg
cgggcggaagagcagctacgcggtgcgaacgagcgaatcgaacgtagcgagcagacgctt
cagcaggtgcaagctgagtggcaagccgccctgcaggccagcccctttgaagatgaagca
gcgtttcaggctgcgcagttggatgatacccagcggcaagagttgactcgccaagtagag
gcgtaccaacgccgcctggctgagcttgaaggcgcgctggagaactaccaaactcagctt
gcggaaaaaacgccgccgaatatggccgcgttgaccagcctaaccgaggcggcccaggtc
gaagagaacacccagctagaggcgtggcgggggctggatgggaggctgaccacgctgcgc
ggtattcgtcaaaagcttgcgactgcccacagggcgcaggcagagctcgaagcccagtat
cagctgtggggcacgctcagcgaggtcgctaatggtcgtacggggcaccgtattagcctg
cagcgctttgtgctgggtgtgctgctggatgacgtattgattcaagcttcggagcgtttg
gtgcgcatgagccgcgggcgttatcagttggtgcgtcgggaagatccctccaaaggtaac
agagcgtcgggtctggagcttgatgtggccgacacctacaccggcaagaaccgttcggta
gcgacactctccggcggggagtcttttatggccgcgctctcgctggcgctagggctctcg
gatgtagtgcaggcttacgctggcggtattcaactggatacgctattcattgatgagggg
tttggcagcctggatcaggatgcgctggatcaagcgattgccatgctcagcgaactgcaa
atgggcgggcgcatgattggagtgatctcccatgtcagcgaactcaaagagcaaatgcca
gttcgtatagacgtaagtgccagccgccacgggagcacggtggaagtaaagggcgtactt
ctctaa
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