Halomonas profundus: LMS44_16365
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Entry
LMS44_16365 CDS
T08361
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
hpro
Halomonas profundus
Brite
KEGG Orthology (KO) [BR:
hpro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpro03400
]
LMS44_16365
DNA repair and recombination proteins [BR:
hpro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LMS44_16365
Archaeal homologous recombinant proteins
LMS44_16365
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
PcrB
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
UEQ02848
LinkDB
All DBs
Position
complement(3584754..3585902)
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AA seq
382 aa
AA seq
DB search
MRLLHTADWHLGRLFHNLSLLDDQRYVLDQLIEIVDRENVDAVLIAGDIYDRSVPPAAAV
TLLDEVLHALCEERKLPVIMISGNHDGAERLRFGARHLRQAGLHILSDLVDFDTPVTLTI
KGAEMDVFGIPYADPEHVRSQFNVEVRDFDGSHRYLVERIEEQRHPTRPCILMSHCFVDG
GSASDSERPLTLGGAESVAWEPMQGFDYVALGHLHGPQYRGGEHIRYSGSLLKYSFSEAS
QRKGVTLVDLDASGVTKIEQIPLIPSREVRVLEGEIDALIAQGRTDANADDYLLVRLTDR
HAILDPMGKLREVYPNVLHLEKPGMLDAQGNQQLDRERLKFSALDMFSDFFAQTSGEPMT
DQQTEAISELIGELSRDEEAQG
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctacttcacaccgccgattggcacctggggcggctgttccacaacctgtcgttg
ctagatgatcagcgctatgtgctcgaccagcttatcgagattgtcgaccgggaaaacgtc
gatgcggtgctgattgcgggcgatatctacgaccgttcggtgccgcctgcggcggcggta
acgctgctggatgaggtgctccacgcgctctgcgaggagcgcaagctgccggtgatcatg
atttcaggtaaccacgatggtgctgagcggcttcgtttcggcgcgcgccacctgcgtcag
gccggtctgcatattctttccgacttagttgattttgacacacctgtaacgctgacgatt
aagggcgctgagatggatgtgttcggcattccctacgccgaccccgaacatgttcgcagc
cagtttaacgtggaggtgcgcgattttgacggctcccaccgctatttggttgagcgcatc
gaagagcagcgtcacccgacacgcccgtgcatattgatgagccactgctttgtggatggc
ggcagcgcctcggactctgaacgcccgctgaccctgggcggtgccgaaagcgtcgcctgg
gagcctatgcaaggctttgactatgtggcgcttggccaccttcacggcccccagtaccgc
ggcggcgagcatattcgttacagcggctcgctgctcaaatatagcttttccgaagccagc
cagcgtaaaggcgtgacgctggtggatcttgatgcgagcggcgtcaccaagatcgagcag
ataccccttattcccagtcgtgaagttcgtgtattagagggcgagatcgatgcgttgatt
gcccaggggcgaacggatgccaatgccgacgactatctgctggtgcggttaaccgaccgc
cacgccattctcgaccccatgggcaagttgcgtgaggtatatcccaatgtgctgcatctc
gagaagcccggcatgctggatgcccagggtaatcagcagcttgaccgtgagcggctgaag
ttcagcgcactggatatgttcagtgactttttcgcccaaaccagcggtgagcccatgacc
gaccaacaaactgaggcgataagcgaactgataggcgagcttagtcgtgacgaagaggct
cagggatga
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