KEGG   Halomonas profundus: LMS44_16585
Entry
LMS44_16585       CDS       T08361                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
hpro  Halomonas profundus
Pathway
hpro03030  DNA replication
hpro03430  Mismatch repair
hpro03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hpro00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LMS44_16585
   03430 Mismatch repair
    LMS44_16585
   03440 Homologous recombination
    LMS44_16585
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hpro03032]
    LMS44_16585
   03400 DNA repair and recombination proteins [BR:hpro03400]
    LMS44_16585
Enzymes [BR:hpro01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LMS44_16585
DNA replication proteins [BR:hpro03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LMS44_16585
DNA repair and recombination proteins [BR:hpro03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LMS44_16585
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2
Other DBs
NCBI-ProteinID: UEQ02889
LinkDB
Position
complement(3635414..3636139)
AA seq 241 aa
MRGIRPRQKIVQADWKGYMAQRAQQAKNPALQQFFGTPLPDPETPISEVPMVALDMETTG
LDERRHAIVSIGLVPFTLNRIKLAERRYWVVNPSRPLAEASITYHHITHSEIAQAPDLDA
ILDELLAQLAGRLVVVHFRNIERPFLNAAVKARRGEGVLFPMIDTMSLEARMHRQTLWAR
FRRWLGRPPVSIRMHASRERYGLPPYQGHHALVDALATAELLQAQIATHYRPETPLKDIW
C
NT seq 726 nt   +upstreamnt  +downstreamnt
atgcgcggtatacgtccacgtcaaaaaatcgtccaggccgattggaagggctatatggcc
caacgagcgcaacaagcgaaaaatcctgcccttcagcaattctttggtacgccgttgcct
gatcctgaaacgcccatttctgaggtgcccatggtggcgctggatatggaaaccactggg
ctggatgagaggcgccatgcgattgttagtattggcctcgtgcccttcacgttaaatcgt
atcaaattggctgagcggcgctattgggtagtgaacccttcgcggccgctagcagaagcc
tcaattacctaccaccacattacccattcagagatcgcccaggcgccggacttagatgcg
atactggacgaactgctggcccagctagcaggtcgcctagtggtcgttcattttcgcaat
attgaacggccctttttgaatgcagctgtcaaagcccgacgtggggaaggggtgctgttt
ccgatgattgataccatgtcgctggaagcgcggatgcaccgccaaaccctatgggcgcgg
ttccgccgctggctgggtcgcccaccggtttccatccgtatgcatgcgagtcgtgagcgc
tatggcttgcccccttatcaaggacatcatgccctagtggatgcattggccaccgcagag
ctattgcaggcgcaaatagccacccattatcgacctgaaacgccattgaaagatatttgg
tgttga

DBGET integrated database retrieval system