Halomonas profundus: LMS44_17455
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Entry
LMS44_17455 CDS
T08361
Symbol
ltrA
Name
(GenBank) group II intron reverse transcriptase/maturase
KO
K00986
RNA-directed DNA polymerase [EC:
2.7.7.49
]
Organism
hpro
Halomonas profundus
Brite
KEGG Orthology (KO) [BR:
hpro00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
LMS44_17455 (ltrA)
Enzymes [BR:
hpro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.49 RNA-directed DNA polymerase
LMS44_17455 (ltrA)
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Gene cluster
GFIT
Motif
Pfam:
RVT_1
GIIM
RhoGAP
Motif
Other DBs
NCBI-ProteinID:
UEQ03057
LinkDB
All DBs
Position
complement(3816745..3818133)
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AA seq
462 aa
AA seq
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MKTDHDANTVTHPEGQGQYPESQPVSVETSPASLSWTKAEPTSLMERVVDPENMERAYRR
VVANKGAPGVDGMTVHQLADHLKQYWPTLRERLLADQYHPSPIRATTIPKPKGGTRQLGI
PTVTDRLIQQALSQVLMPIFDPGFSESSYGYRPKRSAKQAVSAMKAHVTAGHRWVVDLDL
EAFFDRVNHDLLMARVARRVDDKRVLRLIRRYLEAGMFQHGLPTPRRRGTPQGGPLSPLL
ANILLDDMDKALERRGHRFCRYADDVQIYVRSRRAGERVMGSLSEYLESSLRLTVNRRKS
AVDRPWLRGYLGYSLTRHKQSKLTLAKTSLTRMMQRVREILKRGRGRNIQRVIEGLRPVL
RGWANYFNLVDVKRPLEALDQWIRRRLRGLIWRQWKRPSTRRRKLRGLGLDGHRAWKSAG
NGRGPWWNAGASHMNQALPRKWFYDQGLISVLDTVRWLKRSA
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaagacagaccatgacgctaataccgtcactcacccagaggggcaggggcagtacccc
gagtcccagccggtgagcgtcgagaccagcccggcgtcgttatcgtggacgaaagcggag
ccaacctcgctcatggaacgggtcgttgacccggaaaacatggagcgagcttaccgtcgg
gtggtggccaacaaaggcgcaccgggtgtcgatggcatgacggtgcatcaactggctgac
cacctgaagcagtactggccaacgctgcgcgagcggctgttggccgatcagtaccacccc
agcccgatccgagcaaccacgatccctaagcccaagggtgggacgcggcagctcggtatt
cccacggttaccgaccgcctaatccagcaagcgctgtcccaggtactgatgccgatcttc
gacccgggcttctccgagtcgagttacggctaccgccccaagcggagcgccaagcaggcc
gtctcggccatgaaggcccacgtcaccgccggtcaccgctgggtggtcgatcttgacctg
gaagccttcttcgaccgagtgaatcacgacctgctgatggcacgggtcgcgcggcgcgtt
gacgacaagcgtgtactgcgtctgatccgtcgctatctggaggcgggtatgttccagcat
ggcttgcccacgccgaggcggcgggggacaccccaaggcgggcccctcagcccgctactg
gcgaacatcctgctggacgacatggacaaggcgttggaacgccgaggccaccgcttctgc
cgctacgccgacgatgtacaaatctatgtacggagccgacgagcaggcgagcgggtcatg
ggcagcttgagtgagtatctcgagagctcacttcggctgacggtcaatcgccgtaaaagt
gcggtggatcggccatggctacgcggatatctgggctacagcctcactcggcacaagcag
tcgaaactgacgctcgccaagacaagcctgacacgcatgatgcagcgtgtccgtgagatc
ctgaaacgtggcagggggcgtaacatccaacgggtaatcgaagggttgaggccagtccta
cgaggatgggctaactacttcaatcttgttgatgtgaaacgccccttggaagcactggat
caatggatacggcggcgcttacgcggcctgatctggcgacaatggaaacgcccatcgact
cggcgtcggaagctgcgagggctaggcctagacgggcaccgcgcctggaaatcggcgggg
aacggtcgaggcccctggtggaatgccggggcttcgcacatgaatcaggccctgccgagg
aaatggttttatgaccagggactgatctcggtactggatacggtaagatggcttaaacgt
tctgcatga
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