Halomonas profundus: LMS44_17550
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Entry
LMS44_17550 CDS
T08361
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hpro
Halomonas profundus
Pathway
hpro03030
DNA replication
hpro03430
Mismatch repair
hpro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LMS44_17550
03430 Mismatch repair
LMS44_17550
03440 Homologous recombination
LMS44_17550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpro03032
]
LMS44_17550
03400 DNA repair and recombination proteins [BR:
hpro03400
]
LMS44_17550
Enzymes [BR:
hpro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LMS44_17550
DNA replication proteins [BR:
hpro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LMS44_17550
DNA repair and recombination proteins [BR:
hpro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LMS44_17550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UEQ06623
LinkDB
All DBs
Position
complement(3832562..3833215)
Genome browser
AA seq
217 aa
AA seq
DB search
MRLLDRHVTLFSGSLRTLLRRESDRRRCADSPYAWLFQPYMGEELVALACTATPTQSSPV
ISVAAVVLSHQQVHTSRAFVITLGSAKQPASATLRRHHLLCEAGEILPPNSDNLSALVEF
IGNRPIVGWQLEKRIGALNALLSKRLNFALPNAQVDVAKLHQRQLRRLHPEVEAPSSFAQ
ALACWQVPVMGMQSVLGEATASALLYMRLQRIMAQAA
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgttagatcgacatgtgacgctatttagcggctcgctgcgcaccttgttaagg
cgtgaaagtgaccggcgtcgttgtgcagactccccctatgcctggctgtttcagccctat
atgggcgaagagctggtggcgctcgcctgcaccgcaacgcccacgcaatcatcacctgtg
atcagcgtggcggcagtggtgctgagccatcagcaggtgcataccagccgcgcttttgtg
atcacccttggcagcgcgaagcagcccgcgagcgcaacgctgcgccgtcatcacttgctg
tgcgaggcgggggagatactgccaccaaacagtgataacttgagcgcgctagtagaattt
atcggcaatcggcccatcgttggctggcagttagagaagcgcattggagcattgaatgca
ctgctcagtaagcggctgaattttgccctgcccaacgcccaggtcgatgtggcaaaactg
catcagcgccaactgcgccgtttgcacccggaggtcgaagcgcccagcagcttcgcccag
gcgttggcatgctggcaagtacccgtcatgggcatgcagagtgtgcttggagaggccacc
gccagcgcactgctgtatatgcgcctgcagcgtattatggcgcaggctgcttag
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