KEGG   Halomonas profundus: LMS44_18175
Entry
LMS44_18175       CDS       T08361                                 
Symbol
hsdR
Name
(GenBank) type I restriction-modification system endonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
hpro  Halomonas profundus
Brite
KEGG Orthology (KO) [BR:hpro00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hpro02048]
    LMS44_18175 (hsdR)
Enzymes [BR:hpro01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     LMS44_18175 (hsdR)
Prokaryotic defense system [BR:hpro02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   LMS44_18175 (hsdR)
SSDB
Motif
Pfam: EcoEI_R_C ResIII SWI2_SNF2 Helicase_C DEAD HSDR_N DUF4145 AAA_19 THOC7 DUF4407 SLFN-g3_helicase AGAO-like_N2
Other DBs
NCBI-ProteinID: UEQ03191
LinkDB
Position
complement(3981045..3984572)
AA seq 1175 aa
MRVSDQPSTNFGFLAEHDALFVQLGSAAEGAFASDPNTTLIKLRQLSEALAQHVAALSGI
DFDDQTSQSDLLYRLNREIRLESQVRELFHTLRIEGNKAAHQFRTRHKEAMDGLKLAREL
AIWFHRSFGNAGAGFKPGPFVPPQDPSAQLRQLQADIEKLRHDLQNANVELNSSQQLSQL
IDKEKTEYEALAMAMDEEARALAEQARQHEEALAQQQAAYENKIKALQKQLTEQDEQTVN
RQRQQVAKQTKAATDTLVLNEELTRILIDQQLAEAGWEADSLEITYQKGARPEKGAYRAI
AEWPTQHNGKKGRADYVLFVGLAPIAVVEAKKENTNVSGKIDQAERYSKGLNVAAPLVGA
WELTGRTIAWPADDGSHYKVPFVYSCNGRPYVPQLAEQSGTWFRDVREPSNLRRALAQFH
TPGGLLDLLERDKENAEKLLKNEPFGYLKLRDYQQNAIAATESALARNVRSVLLAMATGT
GKTRTIIGLMYRFLKTERYHRILFLVDRTALGQQAIDAFNEAPLEQNQTLSKIYNVAELG
DMAAEAETRVQVATVQAMVKRIFMSDQPPPIDQFDCIIIDEAHRGYTLDQEMTDGELATR
DASQYISSYRRVLDYFDAVKIGLTATPARHTSDIFGKPVFTYSYREAVADDWLIDHEPPL
RYETLLTKNGIQFEKGKPIEVINTQTGEVDTTELEDELSFEVEAFNRRVINENFNQVICE
QLAKELDPFDDEKALIFCATDLHADMIKRLLDDAFKELYNGSYNEAAVAKITGKSDKVDQ
LIRRYKNERYPSIAITVDLLTTGIDVPKISHLVFMRRVRSRILYEQMIGRATRRCDEIGK
TVFRIYDPVDIYAALSEINTMKPLVRDPNITLEQLVDELTDENHLEAALNSPGDQLGESQ
ADVVLSQLSQKVMRVLRKADNKAESRPALKNKLDELHELWGVEPKNLHQHLQKLGPREAS
IFIRQHSGLINQLSQVKTLVGSDKMPVISHHEDKLIQEPTQSYGVHQRPEDYLDSFNAFI
KEQVNQSTALAVVVNKPRDLTRQQLKEVKVLLDNHGYSEANLQSAVRNQTNKDIAASIIG
HIRRAALGEPLKPFEQRVAEAMDRIYTQHDWSTAQRKWLDRLAKQLVHEVIIDREFVNNR
FSDDGGSKQMDKVLGAQLDTVLEELNEAVWPELSA
NT seq 3528 nt   +upstreamnt  +downstreamnt
gtgcgagtcagcgatcaaccatcaacaaacttcggcttcctagccgagcatgacgcgcta
tttgtgcagttgggttcagcggcagaaggggcattcgccagcgaccccaacaccacgtta
atcaagctgcgccagttgagtgaggcgcttgctcagcacgtggcggcgttatcagggatt
gatttcgatgaccaaacgagccaatccgatcttctttatcgcctaaaccgcgagatacgg
cttgagtctcaagtacgagagctttttcatactctacgtatagaaggcaataaagcggct
caccagtttcgcactcgccacaaagaggctatggatggcttgaaactggcccgcgaactg
gcgatatggttccatcgctcgtttggcaacgctggcgctggattcaaacccggtcccttc
gtgccaccacaagatcccagtgcccagctgcgccagttgcaagccgatatcgaaaagctc
cgtcatgacctgcaaaatgcgaatgtcgaattaaacagcagtcagcaactcagccaactg
attgataaagaaaagaccgaatacgaagccctggcaatggcaatggatgaagaagctagg
gcgctagcagaacaagcccgtcagcatgaggaagcgctggcgcaacagcaagcggcctat
gaaaacaaaatcaaagccctgcaaaagcagctcacggagcaagacgaacaaaccgttaat
cggcagcgccagcaagttgccaagcaaaccaaagccgccaccgataccctggtactgaac
gaagagctcacccgaatcctaattgaccagcaactggctgaggcgggttgggaagccgat
agcctggagattacttatcaaaagggtgcgcggcctgaaaagggagcctaccgcgcgatc
gccgaatggcctacgcaacacaacggcaaaaaaggcagggctgactatgtgctgtttgtg
ggccttgcacccatagcggtggtagaagccaagaaagaaaacaccaacgtatccggtaaa
attgaccaagcagaacgttacagtaaaggtctcaacgttgcggcacctcttgtgggtgcc
tgggaacttaccggtcgcactattgcctggcctgcagatgacggaagccactataaggtg
cctttcgtctattcctgtaacggtcggccttacgtccctcaactggccgaacaatcaggt
acctggtttcgggatgtgcgggagcccagtaatcttcgtcgggcactggcgcaattccac
acgcccggtggtttgctggatttacttgaacgcgataaagaaaacgcagaaaagctgctt
aagaacgaacccttcggttatctgaaactacgcgactatcaacagaatgctatcgctgcg
actgaaagtgcgctggcccgaaacgtccgttcagtgctgcttgccatggccaccggcacg
ggtaaaacccgcaccatcattggcctaatgtaccgttttcttaaaaccgaacgttaccac
cgcattctgtttttggtcgaccgcaccgcgcttgggcagcaggccatcgacgcctttaat
gaagcgcctttagagcagaaccagaccctgagcaagatttacaatgttgctgaactgggt
gatatggcggccgaggctgagacccgcgtgcaggtcgctaccgttcaggccatggtgaaa
cgtatctttatgagcgatcagccaccgcccattgaccagtttgattgcatcattatcgac
gaagcccaccggggctatacactggatcaggaaatgaccgatggcgagctggctacccgg
gatgccagtcaatacatctccagttatcggcgcgtgctggactacttcgatgctgtcaaa
atcggcctgacggccaccccagccaggcacaccagcgacattttcggcaaaccggttttc
acctactcctatcgcgaagccgtggcggacgattggctgattgaccatgagccgccgctt
cgctatgaaactctgttgaccaaaaacggcatccagtttgaaaaaggtaagccaatagag
gtgatcaacacccagaccggagaagtggatactacggaactcgaagatgaactgagtttt
gaggtggaggcgtttaatcgccgggtgatcaatgaaaacttcaatcaggtcatctgcgaa
cagctggcgaaggaattagatccctttgatgatgaaaaggccctgattttctgtgccacc
gatctgcatgcggatatgatcaagcggttattggatgatgcctttaaagagctctataac
ggcagctacaacgaggccgccgtggccaaaattaccggcaagagcgataaggtcgatcaa
ctgattcgtcgttataagaatgagcgttatcccagtattgccattacggttgacctactg
acgactggcattgatgtacccaaaataagtcacttggtgtttatgcgtcgggtacgctcg
cgcatcctgtacgagcaaatgattggccgtgccacaaggcgttgcgatgagatcggcaaa
accgtgttccgcatttatgacccggtcgatatctacgctgcgctttccgagatcaatacc
atgaagcccctggtgagggatcccaacatcaccctggagcaactggtcgatgagctgacc
gacgagaaccacctagaagcggcgctaaatagcccgggcgatcagttaggggaaagccag
gctgatgtggtgcttagccagctcagccagaaagtcatgcgagtactgcgcaaggctgac
aataaagccgaaagtcgcccagcactgaaaaacaagctcgacgaactgcatgaactgtgg
ggagtcgagccgaaaaacctgcaccaacatctgcagaaactgggtcctcgcgaagcgtcg
atatttatccgccagcatagcggcctgatcaatcagcttagccaagtgaaaacactggtt
ggcagcgacaaaatgcccgtgatttcgcatcatgaagacaaactcatccaggagcccacc
caaagctacggtgtgcatcaacggccagaggactatctggacagtttcaatgcgtttatc
aaggagcaggttaaccaatcgacggccctggccgtggtcgtcaacaagcctcgcgacctt
acgcgccagcaactcaaggaagtgaaagtgctgctggataaccacggctactcggaagcc
aacctgcaaagcgcagtgcgcaaccagaccaataaagacattgcggctagcatcatcggc
catatccgccgcgcagcactgggcgagcctctcaagccttttgaacagcgtgtagctgaa
gccatggaccgcatctatacccagcacgattggtcaacggcccagcgcaagtggctagac
cgcctagccaaacagctggtgcacgaagtgatcatcgatcgcgagtttgtaaataatcgc
ttttcagatgacggtggctcaaagcagatggataaggtattgggcgcgcagcttgataca
gtgctagaagagctaaacgaagcggtttggccagagctgagcgcgtga

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