KEGG   Halomonas profundus: LMS44_18705
Entry
LMS44_18705       CDS       T08361                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
hpro  Halomonas profundus
Pathway
hpro03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hpro00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    LMS44_18705 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hpro02044]
    LMS44_18705 (tssH)
Secretion system [BR:hpro02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   LMS44_18705 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small AAA_16 AAA_22 TniB AAA_7 AAA_25 AAA_14 NACHT bpMoxR Clp_N DUF7310 SLFN-g3_helicase Sigma54_activat AAA_11 NBD_SMAX1 Packaging_FI AAA_6
Other DBs
NCBI-ProteinID: UEQ03288
LinkDB
Position
complement(4094608..4097229)
AA seq 873 aa
MLRVELPALISRLNGISRHGLEQAAVLCAEQQAPEVTTGHLLLALVDQPLCDVRLLLETL
DIDVEELRARMAEESRPPRDLEVSTPSFSPLLVELLQDAWLLAATEYGHQALRSGVLFTA
LLHNAPRYLGPKSTALLEDINRENLRRHLERLTADSAEAPREGADAKQRQAAHPAGDDSA
LARFATSLTEQARKGELDPVLGRDPEIDQMLDILGRRRKNNPIVIGDAGVGKSAVVEGLA
ARIVAGQVPAALAGVELLTLDLGALQAGAAVKGEFEKRLKAVIDEVKNAPRPTLLFIDEA
HTLIGAGNQEGGGDAANLLKPALARGELRTIAATTWREYKKYFEKDPALSRRFQPIALSE
PSVEQALVILRGLRDVYERAHGVLIGDSGLRAAAALSARYLAGRQLPDKAIDVLDTACTR
LAQALDTPPRKLSHLQSEHIAALRERDQVERERLLGREPDSERHHDLTERLAKLEEELAS
LETAWQAQRECVDAIVALHRQLLEATDNDSVDQLPEGVHQELAEREQQLAQLQEAFALVN
PSVEEAQIAQVIGDWTGVPVERMTSDELTRLTELPTHLDALIQGQGSAIERIHRHLLTAR
ADLRRPGRPLGAFLLVGPSGVGKTETVVQIADQLYGGRQFLTTINMSEYQEKHTVSRLIG
SPPGYVGFGEGGLLTEAIRQRPYSVVLLDEVEKAHPDVLNLFYQAFDKGELADGEGRVID
CKNVLFFLTSNLGYEAIVSYGDDPAALDAALYPVLAEFFKPALLARMEVVPYLPLDGDTL
RDIVKAKLDTLATRIRERHRHAEVVLDDSLAEAICKRATRSENGARMLESVIDGELLPPL
SRALLERMARRENVSRVVLGTDADSGVFTAEVA
NT seq 2622 nt   +upstreamnt  +downstreamnt
atgcttagggtagagctaccggcgcttattagtcgactgaatggaatttctcgtcatggc
ctcgagcaggccgccgtgctgtgcgcagagcagcaagcaccggaggtgaccaccgggcac
ctgctgctggcgctggtcgaccagccgctatgtgatgtgcgcttactgctggaaacgctt
gatattgatgtcgaggagctgcgcgcacgaatggctgaggagagccgtccgcctcgtgat
cttgaggtgtcgacacccagcttttcgccgttattggtagagctgctgcaggacgcgtgg
ttactggcagccaccgagtatggacatcaagcgcttcgcagcggcgtgcttttcacggcg
ctactgcacaacgccccgcgctatttaggtccgaagagcacggcgctactggaagatatc
aatcgcgaaaatctacgccgccacttggagcgtcttacggccgattcagccgaagcacct
cgggagggtgccgacgctaaacaacgccaggctgctcatcctgctggcgatgacagcgca
ctcgcccgttttgctacctcgctgaccgaacaggcgcgcaagggtgagcttgaccctgtg
ctggggcgtgacccggaaatcgaccaaatgctcgatatcctggggcgtcggcgcaaaaac
aaccccattgtgattggcgatgccggggtgggtaaaagtgctgtggtagaaggtttagca
gcacgcattgtggcgggacaagtacccgctgcgctggcaggtgttgagttgctgaccctt
gatctaggtgcgctacaagccggtgccgcggtgaaaggcgagtttgaaaagcgccttaaa
gcggtgattgacgaagtcaaaaacgcccctcgtcccacgctgctatttatagatgaagcg
cacacgctgatcggtgctggtaaccaggaaggcggcggtgacgcggccaacttgctcaag
cccgccctggcccggggcgagttgcgtactatcgccgctactacctggcgtgagtacaaa
aagtactttgaaaaagacccggcgctgtcgcgacgcttccagcccattgcgctttccgag
ccaagcgttgagcaagcgctggtcatcctgcgcggtttgcgggatgtgtatgagcgcgcc
cacggcgtgctgatcggcgatagcggcctgcgtgctgccgctgcgctttctgcccgttac
ctggccggacggcaattgcctgacaaagccattgatgtgctggataccgcctgtacccga
ttggcgcaggctctggataccccgccccgcaagctaagccacttacagagtgaacatatc
gccgcgctacgtgagcgcgatcaggtcgagcgtgaacgtctgctggggcgcgaaccggat
agtgaacgccaccacgacttaaccgaacgcttagccaagctggaagaggagttggcaagc
ctggaaactgcctggcaagcgcagcgcgaatgcgtcgatgccattgtggcgctacaccgc
caactgctagaggcaacggataatgattccgttgatcaactgcccgagggcgtgcatcaa
gaactcgccgaacgggagcagcagctggcccaactgcaagaggcgtttgcgctggttaat
cccagcgttgaagaggcgcaaattgctcaggtgattggcgattggaccggcgtaccggtc
gaacgcatgaccagcgacgagctaacccgcctcaccgaactgccgacccatctggatgcg
ctaatccaggggcagggcagtgcgattgagcgtatccatcgccacttgctaaccgcgcgt
gcggatctccgtcgcccggggcggccattgggcgcatttctgctggtaggccccagcggc
gtgggtaaaaccgaaaccgtggtgcaaattgccgaccagctgtatggcggtcgtcagttt
cttaccacgatcaatatgtcggaataccaagagaagcacacggtttcacgtctgattggt
tcgccgccggggtatgtcgggtttggcgagggcgggctactcaccgaagcgatccgtcag
cgcccttattcggtggtgctgctggacgaagtcgaaaaagcccatcccgatgtgcttaac
ctcttctaccaggcgtttgataaaggcgaactggccgacggggaagggcgcgttatcgat
tgcaaaaacgtgctgttcttcctgacctctaacctgggctacgaagccatcgttagctat
ggcgatgacccagcagcgctggatgccgcgctctacccggtgctggctgagttctttaaa
ccggcgctattagcgcgtatggaagtggtgccttacttgccgctggacggcgataccctg
cgtgacatcgtcaaggccaagctggataccttggcaacacgcatccgtgagcgccatcgc
catgccgaggtggtgctggatgacagcctggccgaggcaatttgtaaacgtgcgacgcgg
agtgaaaacggcgcacgcatgctggagtcggtgatcgacggtgaactgctgccgccgctt
tcccgtgccctgcttgagcgtatggcacggcgcgagaacgttagccgggtagtgttgggc
acggatgccgacagcggtgtctttactgcggaggtggcatag

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