Halomonas profundus: LMS44_19035
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Entry
LMS44_19035 CDS
T08361
Name
(GenBank) glycoside hydrolase family 43 protein
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
hpro
Halomonas profundus
Pathway
hpro00520
Amino sugar and nucleotide sugar metabolism
hpro01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hpro00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
LMS44_19035
Enzymes [BR:
hpro01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
LMS44_19035
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_43
GH43_C2
Motif
Other DBs
NCBI-ProteinID:
UEQ03348
LinkDB
All DBs
Position
complement(4165020..4166636)
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AA seq
538 aa
AA seq
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MDDVIHNPILAGFNPDPSICRVGDDYYLATSTFEWYPGVQVHHSRDLANWTLATRPLNRA
SQLDMRGNPDSCGIWAPCLSYADGLFWLVYTDMKRYEGNFKDGHNYVVTAPRIEGPWSDP
IYLNSSGFDPSLFHDTDGRKWLINLQWDYRQREGRDRFGGIVLQEYDPEQRRLVGDITNI
FAGTELKLTEGSHLYRRDGWYHLLVAEGGTGYQHAVTMARSKTLTGPYEVHSNNPLLTSQ
DDPENPLQRAGHADLVDTPEGDTYLVHLCSRPLPGTRLSPMGRETAIQRVEWGEDGWLRL
EDGGNTPVLKVALSGVTQKPPAPEEHYDFETDTLPAAFQWLRTPYPDRLFSLTERPGYLR
LFGRESVGSWFEQALVARRQDNIHCSAETTLKFEPEDIQQFAGLIAYYNRFKFHYLAVTL
NDTGSKVLSVISCLDDWPNGNLDIADTSVHLAPDATIRLGLDIHARELRFRYAQGNQPWQ
PIGLALDAGLLSDEGSGRAHGYFTGNFLGMAAHDISGRGTPADFQAFCYRRAPLSETR
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgttattcacaacccgattctggccgggtttaaccccgatccctcaatttgc
cgggtaggcgatgactactatctcgctacttcgacctttgagtggtatcccggtgttcag
gttcatcactcccgcgatttggctaactggacgctggccacacggcccttgaaccgtgcc
agccaactagatatgcgcggtaatccagactcatgtggcatctgggcgccatgcttgagc
tacgccgacggcctgttttggctggtatataccgacatgaaacgttatgaggggaacttc
aaggatggacataattacgtggtgacagcgccgcgtatcgaggggccctggagcgatccg
atctacctgaattcaagtggctttgacccttcactgtttcacgataccgacggccgcaag
tggttgatcaacctgcagtgggattatcgtcagcgcgaagggcgggatcgtttcggcgga
atagtgctgcaagagtacgatcctgagcaacgccgcttggtgggcgacatcaccaatatt
ttcgccggtaccgaactgaaactcacagagggttcgcatctctaccggcgcgatggttgg
taccacctcttggtggccgagggtggcaccggctaccagcatgcggtgaccatggcgcgt
tcaaaaacgctgacaggcccttacgaggtacattccaacaatccacttttgacgagtcaa
gatgatcctgaaaacccgctacagagggctggccatgcagatctggtcgacacccctgaa
ggtgatacttacttggtgcatttatgcagcagacccctgccaggcacccggctatcaccg
atggggcgcgagaccgctattcagcgcgtggagtggggcgaagatggctggctacggctc
gaagatgggggcaataccccggtgttaaaggtcgccttgagcggggtaacgcaaaagccc
cctgcgccggaggagcactacgattttgaaacagacacgctgcctgccgcctttcagtgg
ctgcgtaccccttatcctgatcggctcttttcgcttaccgagcggcccggctacttgcgc
ctgtttggccgtgagtcggtgggttcctggtttgagcaggcactagtcgcccggcgccag
gacaacatccactgtagtgccgaaacgacccttaaatttgaacctgaagatattcagcag
tttgccgggctgattgcctactacaaccgcttcaaattccattacctggcggtgaccctg
aatgacaccggcagcaaggtgctcagcgttatcagttgcctggatgactggcctaacggg
aatctggatatcgctgatacgagcgtgcaccttgcccctgatgccacaattcgactcggg
ctggatatccatgcccgggaactgcgctttcgctatgcccaagggaaccagccctggcaa
ccgattgggctcgcgttagatgctgggctgctttccgacgaaggcagcggtcgcgcccac
ggctacttcaccggcaacttcttaggcatggccgcccacgacattagcggccgcggcacc
cccgccgatttccaggcgttttgctatcgccgcgcccctctttcagagacgagataa
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