Halomonas profundus: LMS44_21000
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Entry
LMS44_21000 CDS
T08361
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hpro
Halomonas profundus
Pathway
hpro00260
Glycine, serine and threonine metabolism
hpro00460
Cyanoamino acid metabolism
hpro00630
Glyoxylate and dicarboxylate metabolism
hpro00670
One carbon pool by folate
hpro00680
Methane metabolism
hpro01100
Metabolic pathways
hpro01110
Biosynthesis of secondary metabolites
hpro01120
Microbial metabolism in diverse environments
hpro01200
Carbon metabolism
hpro01230
Biosynthesis of amino acids
hpro01240
Biosynthesis of cofactors
hpro04981
Folate transport and metabolism
Module
hpro_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
hpro00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LMS44_21000
09102 Energy metabolism
00680 Methane metabolism
LMS44_21000
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LMS44_21000
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LMS44_21000
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LMS44_21000
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LMS44_21000
Enzymes [BR:
hpro01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LMS44_21000
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
OKR_DC_1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
UEQ03722
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Position
complement(4620963..4622276)
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AA seq
437 aa
AA seq
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MLQNNFSPNARLASYDTLLAEAIAEETVRQEAHIELIASENYTSKLVMEAQGTQLTNKYA
EGYPGRRYYGGCEFVDKVEALAIERACHLFSANYANVQPHSGAQANAAVFMALVSPGDTV
LGMSLAHGGHLTHGAAPNFSGKHYNAVQYGLKPETGEIDYEEVERLAREHQPKMIIAGFS
AYSRVVDWRRFRAIADEVGAWLMVDMAHVAGLVAAGLYPSPLPYAHVVTTTTHKTLRGPR
GGLILSADGDEALYKKLNGAVFPGQQGGPLMHVIAAKAVAFKEAMNQEFVRYQQQVIDNA
QAMAKVFMERGYDVVSGGTDDHLFLVSLIRQGITGKDADAALGRAHITVNKNTVPNDPQS
PFVTSGLRIGTPAVTTRGFDAEECSELADWICDILDELAAGKDTASIEAEVQAKVTDVCA
QHPVYAESAAEAVESIA
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgcttcagaataatttttcccccaatgcacgtttggccagttacgacacgttgcttgct
gaagcaattgctgaagaaacggttcgccaagaagcgcatattgaattaatcgcctccgaa
aattataccagcaaacttgtcatggaagcgcaaggtacacagctgaccaacaagtatgca
gaaggctatccaggtcgccgttactacggtggctgtgagttcgttgacaaggttgaagcc
ttggcaattgagcgggcttgccacctttttagtgccaattatgccaatgtgcagccgcac
tccggcgcccaggccaatgccgctgtgttcatggcactggtatcgccgggcgatacggta
ttgggtatgagtctggcccacggcggccacttaacccatggtgctgcacccaacttttcg
ggtaagcattacaacgccgtgcagtatggcctcaagccggaaaccggcgagatcgattac
gaagaagtcgagcgcttagctcgcgagcaccagccgaagatgatcatcgcgggtttctcc
gcttactctcgcgtggtggattggcggcgttttcgcgccatcgccgatgaggtaggcgcc
tggttgatggtcgatatggcccacgtcgctggcctggtagccgctggcctctatccgagc
ccgctcccttacgctcatgtggtaactaccaccacccataaaacgctgcgcggcccccgc
ggcggcttgattctctccgccgatggcgacgaagcgctgtataaaaagcttaatggcgcg
gttttcccaggccagcagggcggcccgctgatgcatgttattgccgctaaggcggtggcg
tttaaggaagccatgaaccaggagtttgtgcgctaccagcagcaggtgatcgataacgct
caggccatggccaaggtgtttatggagcgtggctacgacgtggtgtccggcggcaccgac
gaccacctctttttggtttcgcttatccgccagggcattaccggtaaagatgcggatgca
gcccttggccgcgcgcatatcaccgttaataagaatacggtgcctaatgatccccaaagc
cccttcgtgacttccggcctgcgtatcggcacccctgcggtcaccacgcgcggcttcgat
gctgaggagtgtagcgaactagcggactggatttgcgacatcctggacgagctggctgca
ggcaaagacacggcttccattgaagccgaggtgcaagccaaagtgaccgacgtgtgtgcc
cagcatcctgtctacgctgagtccgccgctgaagccgtcgaatccattgcttga
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