Helicobacter pylori Shi470: HPSH_00930
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Entry
HPSH_00930 CDS
T00742
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hps
Helicobacter pylori Shi470
Pathway
hps00260
Glycine, serine and threonine metabolism
hps00460
Cyanoamino acid metabolism
hps00630
Glyoxylate and dicarboxylate metabolism
hps00670
One carbon pool by folate
hps00680
Methane metabolism
hps01100
Metabolic pathways
hps01110
Biosynthesis of secondary metabolites
hps01120
Microbial metabolism in diverse environments
hps01200
Carbon metabolism
hps01230
Biosynthesis of amino acids
hps01240
Biosynthesis of cofactors
hps04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
hps00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HPSH_00930 (glyA)
09102 Energy metabolism
00680 Methane metabolism
HPSH_00930 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HPSH_00930 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HPSH_00930 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HPSH_00930 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HPSH_00930 (glyA)
Enzymes [BR:
hps01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HPSH_00930 (glyA)
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Paralog
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ACD47646
UniProt:
B2US14
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All DBs
Position
175043..176293
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AA seq
416 aa
AA seq
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MAYFLEQTDSEIFELIFEEYKRQNEHLEMIASENYTFASVMEAMGSVLTNKYAEGYPNKR
YYGGCEVVDKIESLAIERAKKLFNCQFANVQAHSGSQANNAVYHALLKPYDKILGMDLSC
GGHLTHGAKVSLTGKHYQSFSYGVNLDGYIDYEEALKIAQSVKPEIIVCGFSAYPREIDF
KKFREIADEVGALLLGDIAHVAGLVVAGEHAHPFPHCHVVSSTTHKTLRGPRGGLILTND
EEIAAKIDKAIFPGTQGGPLMHAIAAKAVGFKENLKPEFKAYAQLVKSNMQVLAKALQEK
NHKLVSGGTSNHLLLMDFLDKPYSGKDADIALGNAGITVNKNTIPGETRSPFVTSGIRIG
SAALSARGMGAKEFEIIGNKISDILNDINNVSLQLHVKEELKAMASQFPVYQQPIF
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcgtattttttagaacaaacggatagtgaaatttttgagcttatctttgaagaatac
aagcggcaaaacgagcatttagaaatgatagcgagcgagaattacacttttgcaagcgtt
atggaggctatggggagtgttttaacgaataaatacgctgaaggctatcctaacaagcgc
tactatggaggctgtgaagtggtggataaaatagaaagcttggccatagaaagggctaaa
aaactttttaattgccagttcgctaatgtgcaagcgcactcaggctcacaagccaataac
gctgtctatcacgctcttttaaagccttatgacaagattttgggcatggatttaagctgt
ggagggcatttaacgcatggcgctaaagtgagtttaaccggtaagcattatcagagcttt
tcttatggcgtgaatttagatggctatattgattatgaagaagcgctaaaaatcgctcaa
agcgttaagccagaaatcattgtgtgcgggttttcagcctatccaagggagattgatttt
aagaaatttagagaaatcgctgatgaagtgggggcgttattattaggcgatatagctcat
gtggcagggcttgtggtagccggtgagcatgcccatcctttcccgcattgccatgtggtt
tcaagcaccactcataagaccttaagagggcctagaggggggcttattttaaccaatgat
gaagagatagcggccaagattgataaagcgatttttccaggaactcaaggcgggcctttg
atgcatgcaattgctgctaaagcggtggggtttaaagagaatctaaaaccagaatttaag
gcttatgcgcaattagtgaaatctaacatgcaagttttggctaaagcgttacaagaaaaa
aaccataagttagtgagtggtggcacttctaaccatttgcttttaatggatttcttagac
aagccttatagcgggaaagacgctgatattgcattagggaatgccggaatcaccgtgaat
aaaaacaccattcctggcgaaacgcgtagcccttttgtaacgagcgggataaggattggc
tcagcggcattgagcgcaaggggcatgggagctaaggaatttgaaatcatagggaataaa
atatcagatattttgaatgatattaataatgttagtttgcaattgcatgtgaaagaagaa
ttgaaagccatggccagtcaattccctgtgtaccaacaacctattttttaa
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