Helicobacter pylori Shi470: HPSH_01880
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Entry
HPSH_01880 CDS
T00742
Name
(GenBank) hemolysin
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
hps
Helicobacter pylori Shi470
Brite
KEGG Orthology (KO) [BR:
hps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hps03009
]
HPSH_01880
Enzymes [BR:
hps01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
HPSH_01880
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
HPSH_01880
Ribosome biogenesis [BR:
hps03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
HPSH_01880
23S rRNA modification factors
HPSH_01880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_25
PrmA
Methyltrans_SAM
ThiS
Methyltransf_9
Methyltransf_31
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
ACD47826
LinkDB
All DBs
Position
complement(360832..361539)
Genome browser
AA seq
235 aa
AA seq
DB search
MRLDYALFNQHLVNSREKAKALVLKNQVLVNKMVVSKPSFIVKEGDKIELIATNLFVSRA
GEKLAAFLETHFVDFKEKVVLDVGASKGGFSEVALLKGAKKVLCVDVGKMQLDENLRNDT
RIECHEECDIREFKTPETIDLVLCDVSFISLYCILEAILPLSDEFLALFKPQFEVGRATK
RNKKGVVVDKKAILNALENFKNHLKTKDFQILKIQESLVKGKNGNVEFFIHFKRA
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttagattacgctttattcaaccagcatttagtgaatagcagagaaaaagctaaa
gcgttggttttaaaaaatcaggttttagtcaataaaatggtggtttctaaaccctctttt
attgttaaagagggcgataagattgagctcatcgctacaaacctattcgttagcagggct
ggggaaaaattagcggcttttttagaaacccatttcgtggattttaaagaaaaggtggtt
ttagatgtgggagcgagcaaggggggctttagtgaagtggctcttttaaaaggggctaaa
aaggtgctttgcgtggatgtggggaaaatgcaattagatgaaaatttaaggaacgataca
cgcatagaatgtcatgaagaatgcgatattagagagtttaaaacgccagaaacaattgat
ttagtgctttgtgatgtgagctttatttctttatattgtattttagaagcgattttgcct
ttaagcgatgaatttttggcgctttttaaaccgcaatttgaagtgggcagagcaacaaaa
cgcaataaaaagggggtggtggtggataaaaaagccattttaaacgctttagaaaacttt
aaaaaccatttaaaaacaaaggattttcaaatcttaaagatccaagaaagcttagtgaaa
gggaaaaacgggaatgttgaattttttatccatttcaagcgagcctaa
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integrated database retrieval system
