KEGG   Helicobacter pylori Shi470: HPSH_02275
Entry
HPSH_02275        CDS       T00742                                 
Name
(GenBank) type I restriction enzyme R protein (hsdR)
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
hps  Helicobacter pylori Shi470
Brite
KEGG Orthology (KO) [BR:hps00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hps02048]
    HPSH_02275
Enzymes [BR:hps01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     HPSH_02275
Prokaryotic defense system [BR:hps02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   HPSH_02275
SSDB
Motif
Pfam: SWI2_SNF2 ResIII HSDR_N T1R_D3-like AAA_22 DUF6899 AAA_16 KinB_sensor HHV-5_US34A
Other DBs
NCBI-ProteinID: ACD47905
LinkDB
Position
complement(435309..438410)
AA seq 1033 aa
MPHNEITRVQVPALMHLAKLGYDFIPTNSKPNLDTTTNILIDSFTQAFERLNPTKNAQDS
LTEMKKRLNYNDLGKSFYEYLLKSERQIIDFDNPNNNLYEMMAELPYKSFRPDTTLFING
LPLVNIEVKQPYAGQGIKEERDRHIKRYENPENKIFYNLAQIWLFSDNLPYDENNPDQGA
FYSASYSPIFQRFVEADRLDITPPPPEKSSNHQSLEEIQKSVLNEFNLKDTDCPKSPKDT
PTNALLTSFCSPKRLCFILKYGISFLKEKSEFKKHIWRYAQMFASLNVLKELQKHYENNP
KDPLKGIIWHTQGSGKTALTYHLTKLIKDFFSPKKTKFYFIVDRLDLLEQAKNEFLKRGL
QAHEAENKEDLSQKLKNSSVFENPQGNDEIIVVNIQKFKAPNEDPSNSAPKEIISKTDLQ
KSIQNSHDLQRVFIIDEAHRSYDPKGCFYANLIECDKTAIKIALTGTPLLEDNAQDKATK
KTFGNYLHTYSYTESIKDGHTLTLQLETIETSYKEKLQEIYRLLQESIIIEDIEVKKETI
FNDEKYIKEMLSYIIRDLLKFRQLHDDNEQLKAMVVCFSSKQARLANFLFNEVQEEVLQK
NPNLRILNKLKSSLILHDEQEVKEKIYSFKHEDTDIAFVFNMLLTGFDLPNLKRLYIHRE
LKDHNLLQALARVNRPYNNMSFGYLIDFVGIQENFDKTTDDYLKELNRFNQSGASSDSNI
KDIFADREVLEQDIKNAYGDLFDYPIDNIEDMTNAIVNMSDINELQKVSHAINTLKERYN
LIRTSNDEKILSLKEKIDIEKINKISSTLHKKAKHLHALKNINEPKNPNDLIILEDLIAT
LDFKIAYKESKELHFKESEEISTKQKQAKEILEKIKDQKDKEIQKIYKDFSKLLQTPATS
QNFEEISHSYSAIISQLKQHHQQTTHLLNKYNNDLAYAITHKRLHKRLMEENISDQVGIF
TILSALKSAIDERISKRQEILNEEYHLKNAIRLELRNAFKKNPSLKDLEKEKELIIQTLF
NELQNHHQGNSHA
NT seq 3102 nt   +upstreamnt  +downstreamnt
atgccacacaatgaaatcacaagggttcaagtccctgccttaatgcatttagccaagttg
ggctatgattttattcccactaattctaagcctaacctagacacgaccactaatatctta
atagatagtttcactcaagcgtttgagcgattaaaccccactaaaaacgcacaagattcg
ctgactgaaatgaaaaaacgcttgaattataatgatttaggcaaaagcttttatgaatac
ttgctcaaaagcgagcgtcaaatcatagactttgataaccctaacaacaatctttatgaa
atgatggctgaattaccctacaaatcctttaggcctgacaccaccctttttatcaatggc
ttgcctttggtgaatatagaagttaagcagccttacgccggacaaggcattaaagaagaa
agagatcgccacatcaaacgctatgaaaaccctgaaaacaagattttttataaccttgcg
caaatttggctctttagcgataacttaccctatgatgaaaacaaccccgatcaaggcgcg
ttttatagcgcttcttattcgcccattttccaacgctttgttgaagctgataggctagat
attaccccccccccccccgaaaaatcatcaaaccatcaatcgcttgaagaaattcaaaaa
agcgtcttaaacgaatttaaccttaaagacaccgactgcccaaaaagccctaaagacacc
cccacaaacgcccttttaacttcgttttgctccccaaaaaggctttgctttatcctaaaa
tacggcatcagtttcttaaaagaaaaatcagagtttaaaaaacacatttggcgttatgcg
cagatgtttgcgagcttgaatgttttaaaagaattgcaaaagcattatgaaaataacccc
aaagaccccctaaaaggcatcatttggcacacgcaaggcagcggtaaaaccgccttaacc
tatcatttaaccaaactcataaaagatttttttagcccgaaaaagactaaattttatttt
attgtggataggttggatttattagagcaagccaaaaacgagtttttaaaaagaggcctt
caagcgcatgaggcagaaaataaagaggatttgagccaaaaattaaaaaactctagcgtg
tttgaaaaccctcaagggaatgatgaaatcatcgttgtgaatatccaaaaattcaaagcc
cccaatgaagacccctccaatagcgctcctaaagaaattatttctaaaacagacttgcaa
aaatccattcaaaacagccacgatttacaaagggtgtttatcatagatgaagcccacagg
agctacgatcctaaaggttgtttttacgctaatttgatagaatgcgacaaaacagcgatt
aaaatcgctctcacaggcacgcccctattagaagacaacgcgcaagataaagccactaaa
aaaacttttggcaactacttgcacacctattcttacacagaatccattaaagacggacac
accctaacactccagttagaaaccattgaaacaagctacaaagaaaaactacaagaaatc
tatcgccttttacaagaaagcatcattattgaagacatagaggttaaaaaagaaacgatt
tttaatgatgaaaaatacattaaagaaatgctctcttatatcattagagatttattgaaa
ttcagacaactgcatgacgacaacgaacaattaaaggctatggtggtttgtttttcaagc
aagcaagccagattggctaattttctttttaatgaagtccaagaagaagtcttacaaaaa
aaccccaacctaaggattttaaacaaactcaaatccagcctgattttgcatgatgaacaa
gaagtcaaagaaaagatttattctttcaaacatgaagatacggatatagcctttgtgttt
aacatgcttttaaccggctttgatttacccaatctcaaacgcctttatatccatagggag
ttaaaagatcacaatttactccaagccctagccagagtgaatcgcccctataacaacatg
tcttttggctaccttatagattttgtagggattcaagaaaattttgacaaaacgactgat
gattatttgaaagaattaaaccgattcaatcaaagcggtgccagtagcgattctaatatc
aaagacatttttgcggatcgtgaggttttagaacaagacattaaaaacgcctatggtgat
ctttttgattaccccattgacaatatagaagacatgactaacgccattgtgaatatgagc
gacattaacgagttacaaaaagtttcacacgccatcaacacgctcaaagagcgctacaat
ttaatccgcacttctaatgatgaaaaaatcctttcactaaaagaaaaaattgatattgaa
aagatcaataaaatctcttcaacgcttcataaaaaagccaaacacctccatgcgttaaaa
aatatcaatgagcctaaaaacccaaacgatttaatcattttagaagatctcatcgctact
ttagactttaaaatagcgtataaagaaagcaaagaattacacttcaaagaaagcgaagaa
attagcaccaaacaaaagcaagctaaagagattttagaaaaaatcaaggatcaaaaagat
aaagaaatccaaaagatttataaagacttttcaaaactgctccaaacgcccgcaacaagc
cagaattttgaggaaatttctcattcttatagcgcgatcatttcacaactcaaacaacac
caccaacaaaccacccacttattaaataaatacaataatgatttagcttatgcgatcacg
cacaaacgcctccacaaacgcctcatggaagaaaacatttctgaccaagtgggaattttc
acgattttaagcgcgctaaaaagcgctattgatgagcgtatttctaagcgtcaagaaatc
ttaaacgaagaataccacctaaaaaatgccataagactagaattaagaaacgctttcaaa
aaaaacccttccttaaaagatttagaaaaagaaaaagaacttatcattcaaacccttttt
aacgagctgcaaaaccaccatcaaggaaattcacatgcctaa

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