Helicobacter pylori Shi470: HPSH_03170
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Entry
HPSH_03170 CDS
T00742
Name
(GenBank) hypothetical protein
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hps
Helicobacter pylori Shi470
Brite
KEGG Orthology (KO) [BR:
hps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hps03009
]
HPSH_03170
Enzymes [BR:
hps01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HPSH_03170
Ribosome biogenesis [BR:
hps03009
]
Prokaryotic type
ribosomal protein modification factors
HPSH_03170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Rotavirus_VP3
CLP1_P
DUF2981
Oxidored_nitro
Motif
Other DBs
NCBI-ProteinID:
ACD48080
UniProt:
B2UT98
LinkDB
All DBs
Position
604162..605481
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AA seq
439 aa
AA seq
DB search
MQIKENKQLCLISLGCSKNLVDSEVMLGKLYNYTLTNDTKSADVILINTCGFIESAKQES
IQTILNAAKDKKKGAILIASGCLSERYKDEIKELIPEVDIFTGVGDYDKIDIMIAKKQNQ
FSEQVFLSEHYNARIITGSSVHAYVKISEGCNQKCSFCAIPSFKGKLQSRELDSILKEAE
NLALKGYTDMTFIAQDSSSFLYDKGQKDGLIQLISAIDKQQALKSARILYLYPSSTTLEL
ISTIESSPIFQNYFDMPIQHISDSMLKKMRRNSSQAHHLKLLDAMKQVKESFIRSTIIVG
HPEENEGEFEELSAFLDEFRFDRLNIFAFSAEENTHAYSLEKVPKKIINARIKALNKIAL
KHQNNSFKALLNKPIKALVENKEGEYFYKARDLRWAPEVDGEILINDSELATPLKPGHYT
IMPSAFKDNILLAKVLSPF
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattaaagaaaacaaacaactctgcttaatttcattaggttgctctaaaaatttg
gtggattcagaagtgatgttaggcaagctttataactacacgctcactaatgacactaag
agcgctgatgtgattttgatcaacacttgcggttttattgaaagcgccaaacaagagagc
atccaaaccattctaaacgccgctaaagacaaaaaaaaaggggcgattttgattgcgagc
gggtgcttgagcgagcgctataaagatgaaatcaaagaattgatccctgaagtggatatt
tttaccggcgtgggggattatgacaagattgatataatgattgctaaaaaacaaaaccag
ttcagcgagcaagtgtttttaagcgagcattataacgcgcgcatcatcacgggatcgagc
gtgcatgcgtatgttaaaatttctgagggttgcaatcaaaaatgctctttttgcgctatc
cctagctttaaggggaaattacaaagcagggaattagactccattttaaaagaagcggaa
aatctcgcacttaaaggttatacggatatgacttttatcgctcaagactctagctccttt
ttatacgataaggggcaaaaagacggcttgatccagctcattagtgcgattgacaagcag
caagccttaaagagcgcgcgcatcttatacctctacccttctagcaccacgctagagctt
attagcacgattgaaagttcgcccatttttcaaaattattttgacatgcccatccagcat
atcagcgactccatgcttaaaaaaatgcggcgcaactccagccaagcgcaccatttaaag
cttttagatgccatgaagcaggttaaagaaagctttataagaagcacgatcattgtaggg
catccggaagaaaatgagggcgaatttgaggaattgagcgcgtttttagacgagttccgg
tttgaccggttgaatatctttgctttcagcgctgaagaaaacacgcatgcctattcttta
gagaaagtgcctaaaaaaatcatcaacgctcgcattaaagccttgaataaaatcgctcta
aagcaccagaacaattcctttaaggctttgttaaataagcccattaaggcgttagtggaa
aataaagagggcgagtatttttacaaagcaagggatttgagatgggcgcctgaagtggat
ggggaaatcttaatcaatgacagcgaactagccacccctttaaaacccgggcattatacg
attatgcctagcgcatttaaagacaatatcttactcgctaaggttttaagccctttttaa
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