Helicobacter pylori Shi470: HPSH_03350
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Entry
HPSH_03350 CDS
T00742
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
hps
Helicobacter pylori Shi470
Brite
KEGG Orthology (KO) [BR:
hps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hps03032
]
HPSH_03350
03400 DNA repair and recombination proteins [BR:
hps03400
]
HPSH_03350
Enzymes [BR:
hps01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HPSH_03350
DNA replication proteins [BR:
hps03032
]
Prokaryotic type
DNA Topoisomerases
HPSH_03350
DNA repair and recombination proteins [BR:
hps03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HPSH_03350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Retrotran_gag_2
Motif
Other DBs
NCBI-ProteinID:
ACD48109
LinkDB
All DBs
Position
complement(636147..638627)
Genome browser
AA seq
826 aa
AA seq
DB search
MQDNLINETKNIVEVGIDSSIEESYLAYSMSVIIGRALPDARDGLKPVHRRILYAMHELG
LTSKVAYKKSARIVGDVIGKYHPHGDNAVYDALVRMAQDFSMRLELVDGQGNFGSIDGDN
AAAMRYTEARMTKASEEILRDIDKDTIDFVPNYDDTLKEPDILPSRLPNLLVNGANGIAV
GMATSIPPHRIDEIIDALVHVLENPNAGLDEILEFVKGPDFPTGGIIYGKAGIIEAYKTG
RGRVKVRAKVHVEKTKNKEIIVLDEMPFQTNKAKLVEQISDLAREKQIEGISEVRDESDR
EGIRVVIELKRDAMSEIVLNHLYKLTTMETTFSIILLAIYNKEPKIFTLLELLRLFLNHR
KTIIIRRTIFELEKAKARAHILEGYLIALDNIDEIVRLIKTSQSPEAAKDALMERFTLSE
IQSKAILEMRLQRLTGLERDKIKEEYQNLLELISDLNGILKSEDRLNEVVKTELLEVKEQ
FSSQRCTEIQEVYENIDIEDLIANEPMVVSMSYKGYVKRVDLKAYERQNRGGKGKLSGNT
YEDDFIENFFVANTHDILLFITNKGQLYRLKVYKIPEASRIAMGKAIVNLISLAPDEKIM
ATLSTKDFSDERSLAFFTKKGVVKRTNLSEFDSNYNGMRAIVLDEGDELVSAKIVDKNAK
HLLIASYLGIFIKFSLEDVREIGRTTRGVRGIRLNENDFVVGAVVISDDSNKLLSVSENG
LGKQTLAEAYREQSRGGKGIIGMKLTQKTGNLVSVISVDDENLDLMILTASAKMIRVSIQ
DIKETIGRNTSGVKLIDTADKVVYANSCPKEEEPENSENPPTQLFE
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgcaagataatttaatcaatgaaacaaaaaatattgtagaagtggggattgattcttct
attgaagaaagctatttagcttattcaatgagcgtgatcatagggcgcgctttaccggac
gctagagatggcttaaagcccgtgcataggcgcattttgtatgcgatgcatgaattaggt
ctcacttccaaagtcgcttataaaaaaagcgctaggatcgtgggtgatgtgattggtaaa
taccacccccatggcgataacgcggtttatgatgcgctagtgagaatggcgcaagatttt
tctatgcgtttggaattggtggatgggcaaggcaactttggctctattgatggcgataat
gctgcggcgatgcgttacactgaagccagaatgaccaaggcgagtgaagaaattttaagg
gatattgataaagacaccattgattttgtgcctaattacgatgacaccttaaaagagccc
gatattttaccaagccgtctgcctaaccttttagtcaatggggctaatgggatcgctgta
gggatggcgacttctatcccccctcacaggattgatgaaatcatagacgctttagtgcat
gtcttagaaaaccctaacgctggattagatgaaattttggaatttgtcaaagggcctgac
tttcccactggcgggatcatttatggcaaggcgggtattattgaagcctataaaacgggg
cgagggcgcgtgaaagtgcgcgccaaagtgcatgtggaaaagacgaaaaataaagaaatc
atcgttttagatgaaatgccttttcaaaccaataaagccaaattagtggaacaaatcagc
gatttagcgcgagaaaaacaaattgaaggcattagcgaagtgcgcgatgagagcgataga
gagggcattagagtggtgattgaattaaaaagagacgcgatgagtgaaattgtcttaaac
cacctctacaaactcaccaccatggagaccacttttagtatcattttactcgctatttat
aataaagagcctaagattttcacgcttttagagttgttgcgcctttttttaaaccacaga
aaaaccattattataagacgcactatttttgaattagagaaggctaaagctagagcgcat
attttagagggctatttgatcgcattagacaatattgatgaaatcgtgcgactcattaaa
acaagccaaagcccagaagcggctaaagacgccttaatggagcgttttactttgagcgaa
atccagagcaaagccattttagaaatgcgtttgcagcgcttaacaggccttgaaagagat
aaaatcaaagaagaataccaaaacttgctagagcttattagtgatctcaatggcatttta
aagagcgaagatcgcttgaatgaagtcgtcaaaacagagcttttagaagtcaaagagcaa
ttttcttctcaaaggtgcactgaaattcaagaagtttatgaaaatattgacatagaagat
ttgatcgctaatgagcctatggtggtgagcatgagctataaaggctatgtgaaaagagtg
gatttaaaagcttatgaaaggcaaaatcgtggcggtaagggcaagctttcaggcaacact
tatgaagacgatttcattgaaaacttttttgtggctaacacgcatgatattttgctcttt
atcaccaacaaggggcagttgtatcgtttgaaagtctataagatcccagaagcgagccgg
atcgctatgggtaaagccatcgtgaatttaatctcgctcgctcctgatgaaaagatcatg
gcaaccctaagcaccaaagactttagtgatgaacgctctttagctttcttcaccaaaaaa
ggcgtggtgaagcgcaccaatttgagcgaatttgacagcaactataacggtatgagagcg
attgttttagatgaaggcgatgaattggtgagcgcaaaaattgtggataaaaacgctaaa
catttgctcatcgcatcgtatttgggcattttcattaaattctctttagaagatgtgcgc
gagatcggaagaactactcgtggggttagagggatcaggctgaatgaaaatgattttgtt
gtcggcgcggtcgttattagcgatgacagcaacaagcttttgagcgtgagtgaaaacggg
cttggcaagcaaactttagccgaagcgtatagagagcaatctcgtggaggtaaggggatt
attggcatgaagctcactcaaaagaccggcaatctagtgagcgttatcagtgtggatgat
gaaaacctggatttgatgatccttactgcaagcgcgaaaatgatcagagtttctattcaa
gatattaaagaaaccatcggaagaaatactagtggggtaaaactcatagacaccgctgat
aaagtcgtgtatgccaattcttgccctaaagaagaagagccagaaaattcagaaaaccct
cccacacaattgtttgaatga
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