KEGG   Helicobacter pylori Shi470: HPSH_03545
Entry
HPSH_03545        CDS       T00742                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
hps  Helicobacter pylori Shi470
Brite
KEGG Orthology (KO) [BR:hps00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    HPSH_03545 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hps03019]
    HPSH_03545 (rnc)
   03009 Ribosome biogenesis [BR:hps03009]
    HPSH_03545 (rnc)
   03036 Chromosome and associated proteins [BR:hps03036]
    HPSH_03545 (rnc)
Enzymes [BR:hps01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     HPSH_03545 (rnc)
Messenger RNA biogenesis [BR:hps03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     HPSH_03545 (rnc)
Ribosome biogenesis [BR:hps03009]
 Eukaryotic type
  90S particles
   RNase
    HPSH_03545 (rnc)
 Prokaryotic type
  rRNA processing factors
   HPSH_03545 (rnc)
Chromosome and associated proteins [BR:hps03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     HPSH_03545 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DSRM_2 DND1_DSRM
Other DBs
NCBI-ProteinID: ACD48146
UniProt: B2UTG4
LinkDB
Position
complement(680009..680725)
AA seq 238 aa
MKNKRSQNSPYITNSPYATLEKALGYSFKDKRLLEQALTHKSCKLALNNERLEFLGDAVL
GLVIGELLYHKFYQYDEGKLSKLRASIVSAHGFTKLAKVIALQDYLHISSSEEISNGREK
PSILSSAFEALMAGVYLEAGLAKVQKIIQNLLNRAYKRLDLEHLFMDYKTALQELTQAQF
CVIPTYQLLKEKGPDHHKEFEMALYIQDKIYATAKGKSKKEAEQQCAYQALQKLKEVK
NT seq 717 nt   +upstreamnt  +downstreamnt
atgaaaaacaaacgctctcaaaatagcccttatataacgaatagcccttatgcaacgcta
gaaaaagctttggggtattcttttaaagacaagcgtttattggagcaagccttaacgcat
aaatcatgcaagctcgctttaaacaatgagcgcttggaatttttaggcgatgcggtgttg
ggtttggtgataggggagttgctataccataaattctatcaatacgatgagggcaaactc
tctaaattaagggcttctattgtgagcgcgcatggttttactaaattagcgaaagtgatc
gctttacaagattatttgcacatttcttcttctgaagaaatttctaatgggagagaaaaa
ccctctattttatcaagcgcttttgaggctttaatggccggggtgtatttagaagcgggg
ttagctaaggtgcaaaaaatcatacaaaatttactcaatcgcgcttacaagcgtttggat
ttggagcatttgtttatggactataaaaccgctttacaggaattaacccaagcgcaattt
tgcgtgatccccacttaccaattgctcaaagaaaaaggccccgatcaccataaagaattt
gaaatggctctatacattcaagataaaatatacgcgaccgctaaaggcaaaagcaaaaaa
gaagccgaacagcaatgcgcttatcaagcgcttcaaaaacttaaggaagtaaaatga

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